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    Tmem231 transmembrane protein 231 [ Mus musculus (house mouse) ]

    Gene ID: 234740, updated on 17-Oct-2018

    Summary

    Official Symbol
    Tmem231provided by MGI
    Official Full Name
    transmembrane protein 231provided by MGI
    Primary source
    MGI:MGI:2685024
    See related
    Ensembl:ENSMUSG00000031951 Vega:OTTMUSG00000061806
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm178; 4932417I16Rik
    Expression
    Ubiquitous expression in testis adult (RPKM 7.4), ovary adult (RPKM 5.8) and 27 other tissues See more
    Orthologs

    Genomic context

    See Tmem231 in Genome Data Viewer
    Location:
    8; 8 E1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 8 NC_000074.6 (111912011..111933818, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (114435918..114457691, complement)

    Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene transmembrane protein 170 Neighboring gene carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5 Neighboring gene predicted gene, 36531 Neighboring gene gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2 Neighboring gene adenosine deaminase, tRNA-specific 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    camera-type eye development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    cell projection organization IEA
    Inferred from Electronic Annotation
    more info
     
    cilium assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    embryonic digit morphogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    in utero embryonic development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    neuroepithelial cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of protein localization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    regulation of protein localization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    smoothened signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    vasculature development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    MKS complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    ciliary membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    ciliary membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    ciliary transition zone IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    ciliary transition zone IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cilium IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033321.2NP_001028493.1  transmembrane protein 231 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AU254458, BC100402, BY031259
      Consensus CDS
      CCDS52676.1
      UniProtKB/Swiss-Prot
      Q3U284
      Related
      ENSMUSP00000034429.7, OTTMUSP00000078214, ENSMUST00000034429.8
      Conserved Domains (1) summary
      pfam10149
      Location:1301
      TM231; Transmembrane protein 231
    2. NM_001357348.1NP_001344277.1  transmembrane protein 231 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AK030046, AU254458, BY031259
      Conserved Domains (1) summary
      pfam10149
      Location:19217
      TM231; Transmembrane protein 231

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000074.6 Reference GRCm38.p4 C57BL/6J

      Range
      111912011..111933818 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011248363.2XP_011246665.1  transmembrane protein 231 isoform X2

      Conserved Domains (1) summary
      pfam10149
      Location:2199
      TM231; Transmembrane protein 231
    2. XM_011248362.2XP_011246664.1  transmembrane protein 231 isoform X1

      Conserved Domains (1) summary
      pfam10149
      Location:19217
      TM231; Transmembrane protein 231
    3. XM_006530926.3XP_006530989.1  transmembrane protein 231 isoform X1

      Conserved Domains (1) summary
      pfam10149
      Location:19217
      TM231; Transmembrane protein 231
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