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    Heatr3 HEAT repeat containing 3 [ Mus musculus (house mouse) ]

    Gene ID: 234549, updated on 23-Jun-2021

    Summary

    Official Symbol
    Heatr3provided by MGI
    Official Full Name
    HEAT repeat containing 3provided by MGI
    Primary source
    MGI:MGI:2444491
    See related
    Ensembl:ENSMUSG00000031657
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C030036P15Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 13.1), limb E14.5 (RPKM 13.0) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Heatr3 in Genome Data Viewer
    Location:
    8; 8 C3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (88864453..88901656)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (88137885..88171952)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (90661784..90695851)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene 2716 Neighboring gene RAB11a, member RAS oncogene family pseudogene Neighboring gene CTD nuclear envelope phosphatase 1 regulatory subunit 1 Neighboring gene microRNA 7071 Neighboring gene terminal nucleotidyltransferase 4B Neighboring gene adenylate cyclase 7 Neighboring gene bromodomain containing 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables unfolded protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in protein import into nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in ribosomal large subunit biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    HEAT repeat-containing protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172757.3NP_766345.3  HEAT repeat-containing protein 3

      See identical proteins and their annotated locations for NP_766345.3

      Status: PROVISIONAL

      Source sequence(s)
      BC065060
      Consensus CDS
      CCDS22508.1
      UniProtKB/Swiss-Prot
      Q8BQM4
      Related
      ENSMUSP00000034079.8, ENSMUST00000034079.14
      Conserved Domains (2) summary
      cd13394
      Location:2672
      Syo1_like; Fungal symportin 1 (syo1) and similar proteins
      sd00043
      Location:69108
      ARM; armadillo repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      88864453..88901656
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004934819.1 RNA Sequence

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