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    Arglu1 arginine and glutamate rich 1 [ Mus musculus (house mouse) ]

    Gene ID: 234023, updated on 31-Jan-2019

    Summary

    Official Symbol
    Arglu1provided by MGI
    Official Full Name
    arginine and glutamate rich 1provided by MGI
    Primary source
    MGI:MGI:2442985
    See related
    Ensembl:ENSMUSG00000040459
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    C130008N12; 9430010O03Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 64.7), CNS E14 (RPKM 55.4) and 28 other tissues See more
    Orthologs

    Genomic context

    See Arglu1 in Genome Data Viewer
    Location:
    8; 8 A1.1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 8 NC_000074.6 (8666297..8690549, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (8666576..8690537, complement)

    Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 31463 Neighboring gene ephrin B2 Neighboring gene microRNA 7654 Neighboring gene IKAROS family zinc finger 5 pseudogene Neighboring gene predicted gene, 39127

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    arginine and glutamate-rich protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_176849.3NP_789819.2  arginine and glutamate-rich protein 1

      See identical proteins and their annotated locations for NP_789819.2

      Status: VALIDATED

      Source sequence(s)
      BC029219, BU514203, BY756892, CB528163
      Consensus CDS
      CCDS40215.1
      UniProtKB/Swiss-Prot
      Q3UL36
      Related
      ENSMUSP00000039493.8, ENSMUST00000048545.9
      Conserved Domains (1) summary
      pfam15346
      Location:128258
      ARGLU; Arginine and glutamate-rich 1

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000074.6 Reference GRCm38.p4 C57BL/6J

      Range
      8666297..8690549 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006508760.3XP_006508823.1  arginine and glutamate-rich protein 1 isoform X2

      Conserved Domains (1) summary
      pfam15346
      Location:80210
      ARGLU; Arginine and glutamate-rich 1
    2. XM_006508759.3XP_006508822.1  arginine and glutamate-rich protein 1 isoform X1

      Conserved Domains (1) summary
      pfam15346
      Location:110240
      ARGLU; Arginine and glutamate-rich 1
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