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    Tmem41b transmembrane protein 41B [ Mus musculus (house mouse) ]

    Gene ID: 233724, updated on 23-Jun-2021

    Summary

    Official Symbol
    Tmem41bprovided by MGI
    Official Full Name
    transmembrane protein 41Bprovided by MGI
    Primary source
    MGI:MGI:1289225
    See related
    Ensembl:ENSMUSG00000047554
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AU018901; D7Ertd70; D7Ertd70e; D7Ertd743; D7Ertd743e; 1500015G02Rik; 1500031M19Rik
    Expression
    Ubiquitous expression in placenta adult (RPKM 10.3), cerebellum adult (RPKM 8.5) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Tmem41b in Genome Data Viewer
    Location:
    7 E3; 7 57.69 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (109570422..109586011, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (109971215..109986804, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (117115701..117129744, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene signal peptide, CUB domain, EGF-like 2 Neighboring gene DENN/MADD domain containing 5A Neighboring gene RIKEN cDNA 1600010M07 gene Neighboring gene predicted gene, 23100 Neighboring gene predicted gene, 25636 Neighboring gene importin 7

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 
    • Targeted (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC38847

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in autophagosome assembly ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within autophagy IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within nervous system development IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in endoplasmic reticulum membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondria-associated endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in mitochondria-associated endoplasmic reticulum membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    transmembrane protein 41B
    Names
    Stasimon
    protein stasimon

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_153525.5NP_705745.3  transmembrane protein 41B

      See identical proteins and their annotated locations for NP_705745.3

      Status: PROVISIONAL

      Source sequence(s)
      AC140235
      Consensus CDS
      CCDS21742.1
      UniProtKB/Swiss-Prot
      Q8K1A5
      Related
      ENSMUSP00000091641.6, ENSMUST00000094097.12
      Conserved Domains (1) summary
      pfam09335
      Location:129248
      VTT; VMP1, TMEM41, and TVP38 (VTT) domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      109570422..109586011 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030242499.1XP_030098359.1  transmembrane protein 41B isoform X1

      Related
      ENSMUSP00000112574.2, ENSMUST00000118429.8
      Conserved Domains (1) summary
      pfam09335
      Location:129248
      VTT; VMP1, TMEM41, and TVP38 (VTT) domain
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