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    Leng8 leukocyte receptor cluster (LRC) member 8 [ Mus musculus (house mouse) ]

    Gene ID: 232798, updated on 23-Jun-2021

    Summary

    Official Symbol
    Leng8provided by MGI
    Official Full Name
    leukocyte receptor cluster (LRC) member 8provided by MGI
    Primary source
    MGI:MGI:2142195
    See related
    Ensembl:ENSMUSG00000035545
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AW049671
    Expression
    Ubiquitous expression in ovary adult (RPKM 180.8), thymus adult (RPKM 168.1) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Leng8 in Genome Data Viewer
    Location:
    7; 7 A1
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (4139998..4151176)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (4137013..4148177)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (4088658..4099775)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 9430041J12 gene Neighboring gene predicted gene, 23741 Neighboring gene RIKEN cDNA D030047H15 gene Neighboring gene tweety family member 1 Neighboring gene CDC42 effector protein (Rho GTPase binding) 5 Neighboring gene leukocyte receptor cluster (LRC) member 9

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    leukocyte receptor cluster member 8 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001374609.1NP_001361538.1  leukocyte receptor cluster member 8 homolog isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC101941, AC110496
      Consensus CDS
      CCDS90150.1
      Conserved Domains (2) summary
      PRK10263
      Location:113362
      PRK10263; DNA translocase FtsK; Provisional
      cl24019
      Location:568780
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
    2. NM_172736.3NP_766324.1  leukocyte receptor cluster member 8 homolog isoform 2

      See identical proteins and their annotated locations for NP_766324.1

      Status: VALIDATED

      Source sequence(s)
      AC101941, AC110496
      Consensus CDS
      CCDS20731.1
      UniProtKB/Swiss-Prot
      Q8CBY3
      Related
      ENSMUSP00000046465.7, ENSMUST00000037472.13
      Conserved Domains (3) summary
      PRK10263
      Location:113362
      PRK10263; DNA translocase FtsK; Provisional
      PRK14086
      Location:114234
      dnaA; chromosomal replication initiator protein DnaA
      cl24019
      Location:568749
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      4139998..4151176
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036152932.1XP_036008825.1  leukocyte receptor cluster member 8 homolog isoform X1

      Conserved Domains (2) summary
      PRK10263
      Location:113399
      PRK10263; DNA translocase FtsK; Provisional
      cl24019
      Location:585799
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
    2. XM_006539759.5XP_006539822.1  leukocyte receptor cluster member 8 homolog isoform X3

      See identical proteins and their annotated locations for XP_006539822.1

      UniProtKB/TrEMBL
      D3YWS8
      Related
      ENSMUSP00000112428.2, ENSMUST00000121270.8
      Conserved Domains (2) summary
      PRK10263
      Location:113362
      PRK10263; DNA translocase FtsK; Provisional
      cl24019
      Location:568780
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
    3. XM_036152933.1XP_036008826.1  leukocyte receptor cluster member 8 homolog isoform X1

      Conserved Domains (2) summary
      PRK10263
      Location:113399
      PRK10263; DNA translocase FtsK; Provisional
      cl24019
      Location:585799
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
    4. XM_030242411.2XP_030098271.1  leukocyte receptor cluster member 8 homolog isoform X3

      Conserved Domains (2) summary
      PRK10263
      Location:113362
      PRK10263; DNA translocase FtsK; Provisional
      cl24019
      Location:568780
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
    5. XM_036152936.1XP_036008829.1  leukocyte receptor cluster member 8 homolog isoform X4

      Conserved Domains (1) summary
      cl24019
      Location:548762
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
    6. XM_036152938.1XP_036008831.1  leukocyte receptor cluster member 8 homolog isoform X5

      Conserved Domains (1) summary
      cl24019
      Location:531745
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
    7. XM_036152935.1XP_036008828.1  leukocyte receptor cluster member 8 homolog isoform X4

      Conserved Domains (1) summary
      cl24019
      Location:548762
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
    8. XM_036152937.1XP_036008830.1  leukocyte receptor cluster member 8 homolog isoform X5

      Conserved Domains (1) summary
      cl24019
      Location:531745
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
    9. XM_036152934.1XP_036008827.1  leukocyte receptor cluster member 8 homolog isoform X2

      Conserved Domains (2) summary
      PRK10263
      Location:113399
      PRK10263; DNA translocase FtsK; Provisional
      cl24019
      Location:585766
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
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