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    Zfp212 Zinc finger protein 212 [ Mus musculus (house mouse) ]

    Gene ID: 232784, updated on 23-Jun-2021

    Summary

    Official Symbol
    Zfp212provided by MGI
    Official Full Name
    Zinc finger protein 212provided by MGI
    Primary source
    MGI:MGI:2682609
    See related
    Ensembl:ENSMUSG00000052763
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Znf21; Znf212; mKIAA3011
    Expression
    Ubiquitous expression in thymus adult (RPKM 8.8), ovary adult (RPKM 7.7) and 28 other tissues See more
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    Genomic context

    See Zfp212 in Genome Data Viewer
    Location:
    6; 6 B2.3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (47897502..47909573)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (47920568..47932639)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (47870567..47882638)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 786 Neighboring gene zinc finger protein 398 Neighboring gene zinc finger protein 282 Neighboring gene predicted gene, 52899 Neighboring gene zinc finger protein 783 Neighboring gene zinc finger protein 956 Neighboring gene ribosomal protein S2 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    zinc finger protein 212
    Names
    Zinc finger protein C2H2-150

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001145881.1NP_001139353.1  zinc finger protein 212 isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1, resulting in an isoform (2) that is 1 aa shorter than isoform 1
      Source sequence(s)
      AI646736, AK129476, BC064742, CJ054342
      UniProtKB/TrEMBL
      Q6P238, Q6ZPF1
      Conserved Domains (5) summary
      cd07765
      Location:142180
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:357473
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:367387
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:425445
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:437462
      zf-H2C2_2; Zinc-finger double domain
    2. NM_145576.2NP_663551.2  zinc finger protein 212 isoform 1

      See identical proteins and their annotated locations for NP_663551.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      AI646736, AK129476, BC064742, CF915685, CJ054342
      Consensus CDS
      CCDS51761.1
      UniProtKB/TrEMBL
      G3X8R7, Q6P238, Q6ZPF1
      Related
      ENSMUSP00000009411.8, ENSMUST00000009411.9
      Conserved Domains (5) summary
      cd07765
      Location:142180
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      COG5048
      Location:358474
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:368388
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:426446
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:438463
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      47897502..47909573
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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