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    Mrps35 mitochondrial ribosomal protein S35 [ Mus musculus (house mouse) ]

    Gene ID: 232536, updated on 23-May-2018

    Summary

    Official Symbol
    Mrps35provided by MGI
    Official Full Name
    mitochondrial ribosomal protein S35provided by MGI
    Primary source
    MGI:MGI:2385255
    See related
    Ensembl:ENSMUSG00000040112 Vega:OTTMUSG00000023793
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MDSO23; MRPS28; MRP-S28
    Expression
    Ubiquitous expression in bladder adult (RPKM 15.2), liver E14 (RPKM 14.3) and 28 other tissues See more
    Orthologs

    Genomic context

    See Mrps35 in Genome Data Viewer
    Location:
    6; 6 G3
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 6 NC_000072.6 (147042740..147070906)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (146991292..147019424)

    Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene PTPRF interacting protein, binding protein 1 (liprin beta 1) Neighboring gene predicted gene, 35876 Neighboring gene RAB15 effector protein Neighboring gene MANSC domain containing 4 Neighboring gene kelch-like 42

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Clone Names

    • MGC28446

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    mitochondrial small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mitochondrion HDA PubMed 
    ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    28S ribosomal protein S35, mitochondrial
    Names
    MRP-S35
    S35mt
    mitochondrial ribosomal protein S34
    mrps35

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145573.2NP_663548.2  28S ribosomal protein S35, mitochondrial

      See identical proteins and their annotated locations for NP_663548.2

      Status: VALIDATED

      Source sequence(s)
      AK077677
      Consensus CDS
      CCDS51959.1
      UniProtKB/Swiss-Prot
      Q8BJZ4
      UniProtKB/TrEMBL
      A0A0R4J0L6
      Related
      ENSMUSP00000048348.7, OTTMUSP00000028123, ENSMUST00000036111.9, OTTMUST00000058134
      Conserved Domains (1) summary
      pfam10213
      Location:162248
      MRP-S28; Mitochondrial ribosomal subunit protein

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000072.6 Reference GRCm38.p4 C57BL/6J

      Range
      147042740..147070906
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017321561.1XP_017177050.1  28S ribosomal protein S35, mitochondrial isoform X2

    2. XM_006507037.2XP_006507100.1  28S ribosomal protein S35, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_006507100.1

      Conserved Domains (1) summary
      pfam10213
      Location:118204
      MRP-S28; Mitochondrial ribosomal subunit protein
    3. XM_006507035.3XP_006507098.1  28S ribosomal protein S35, mitochondrial isoform X1

      See identical proteins and their annotated locations for XP_006507098.1

      Conserved Domains (1) summary
      pfam10213
      Location:118204
      MRP-S28; Mitochondrial ribosomal subunit protein

    RNA

    1. XR_869605.2 RNA Sequence

    Reference GRCm38.p4 NOD/ShiLtJ

    Genomic

    1. NT_166305.2 Reference GRCm38.p4 NOD/ShiLtJ

      Range
      3537843..3566089
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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