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    Mrps35 mitochondrial ribosomal protein S35 [ Mus musculus (house mouse) ]

    Gene ID: 232536, updated on 8-Feb-2024

    Summary

    Official Symbol
    Mrps35provided by MGI
    Official Full Name
    mitochondrial ribosomal protein S35provided by MGI
    Primary source
    MGI:MGI:2385255
    See related
    Ensembl:ENSMUSG00000040112 AllianceGenome:MGI:2385255
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MDSO23; MRPS28; MRP-S28
    Summary
    Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Located in mitochondrion. Is expressed in several structures, including early conceptus; gonad; heart; liver; and metanephros. Orthologous to human MRPS35 (mitochondrial ribosomal protein S35). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Ubiquitous expression in bladder adult (RPKM 15.2), liver E14 (RPKM 14.3) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Mrps35 in Genome Data Viewer
    Location:
    6 G3; 6 77.7 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (146944270..146972399)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (147042728..147070906)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene PTPRF interacting protein, binding protein 1 (liprin beta 1) Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:146991206-146991315 Neighboring gene predicted gene, 35876 Neighboring gene RAB15 effector protein Neighboring gene STARR-seq mESC enhancer starr_17814 Neighboring gene STARR-seq mESC enhancer starr_17819 Neighboring gene MANSC domain containing 4 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:147048014-147048197 Neighboring gene kelch-like 42

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC28446

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in mitochondrial translation NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane NAS
    Non-traceable Author Statement
    more info
    PubMed 
    part_of mitochondrial small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of mitochondrial small ribosomal subunit NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in mitochondrion HDA PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    small ribosomal subunit protein mS35
    Names
    28S ribosomal protein S35, mitochondrial
    MRP-S35
    S35mt
    mitochondrial ribosomal protein S34

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001411632.1NP_001398561.1  small ribosomal subunit protein mS35 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC153575
      UniProtKB/Swiss-Prot
      B2KFS5, Q8BJZ4, Q8VCG7
    2. NM_001411633.1NP_001398562.1  small ribosomal subunit protein mS35 isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC153575
    3. NM_001411634.1NP_001398563.1  small ribosomal subunit protein mS35 isoform 4

      Status: VALIDATED

      Source sequence(s)
      AC153575
    4. NM_145573.3NP_663548.2  small ribosomal subunit protein mS35 isoform 1

      See identical proteins and their annotated locations for NP_663548.2

      Status: VALIDATED

      Source sequence(s)
      AC153575
      Consensus CDS
      CCDS51959.1
      UniProtKB/Swiss-Prot
      B2KFS5, Q8BJZ4, Q8VCG7
      UniProtKB/TrEMBL
      A0A0R4J0L6
      Related
      ENSMUSP00000048348.8, ENSMUST00000036111.10
      Conserved Domains (1) summary
      pfam10213
      Location:162248
      MRP-S28; Mitochondrial ribosomal subunit protein

    RNA

    1. NR_177442.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC153575
    2. NR_177443.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC153575
    3. NR_177444.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC153575
    4. NR_177445.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC153575

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      146944270..146972399
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)