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    Haus6 HAUS augmin-like complex, subunit 6 [ Mus musculus (house mouse) ]

    Gene ID: 230376, updated on 31-Jan-2019

    Summary

    Official Symbol
    Haus6provided by MGI
    Official Full Name
    HAUS augmin-like complex, subunit 6provided by MGI
    Primary source
    MGI:MGI:1923389
    See related
    Ensembl:ENSMUSG00000038047
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D4Ertd27e; mKIAA1574; 9830144E06; 6230416J20Rik
    Expression
    Broad expression in CNS E11.5 (RPKM 5.7), liver E14 (RPKM 3.9) and 20 other tissues See more
    Orthologs

    Genomic context

    See Haus6 in Genome Data Viewer
    Location:
    4 C4; 4 40.69 cM
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 4 NC_000070.6 (86578857..86612075, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (86227188..86257926, complement)

    Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene stabilizer of axonemal microtubules 1, opposite strand Neighboring gene Ras-related GTP binding A Neighboring gene small Cajal body-specific RNA 8 Neighboring gene perilipin 2 Neighboring gene perilipin 2 Neighboring gene predicted gene, 42312

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    centrosome cycle ISO
    Inferred from Sequence Orthology
    more info
     
    spindle assembly ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    HAUS complex ISO
    Inferred from Sequence Orthology
    more info
     
    centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    microtubule organizing center ISO
    Inferred from Sequence Orthology
    more info
     
    nuclear speck ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    HAUS augmin-like complex subunit 6
    Names
    likely ortholog of H. sapiens family with sequence similarity 29, member A (FAM29A)

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173400.3NP_775576.2  HAUS augmin-like complex subunit 6

      See identical proteins and their annotated locations for NP_775576.2

      Status: VALIDATED

      Source sequence(s)
      AL824707, BB851382, BC068237, BX516644, BY471626
      Consensus CDS
      CCDS18307.1
      UniProtKB/TrEMBL
      Q6NV99
      Related
      ENSMUSP00000070504.7, ENSMUST00000070607.8
      Conserved Domains (1) summary
      pfam14661
      Location:15238
      HAUS6_N; HAUS augmin-like complex subunit 6 N-terminus

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000070.6 Reference GRCm38.p4 C57BL/6J

      Range
      86578857..86612075 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006537875.2XP_006537938.1  HAUS augmin-like complex subunit 6 isoform X1

      Conserved Domains (1) summary
      pfam14661
      Location:15238
      HAUS6_N; HAUS augmin-like complex subunit 6 N-terminus
    2. XM_011250010.2XP_011248312.1  HAUS augmin-like complex subunit 6 isoform X2

      See identical proteins and their annotated locations for XP_011248312.1

      Conserved Domains (1) summary
      pfam14661
      Location:899
      HAUS6_N; HAUS augmin-like complex subunit 6 N-terminus
    3. XM_011250011.2XP_011248313.1  HAUS augmin-like complex subunit 6 isoform X2

      See identical proteins and their annotated locations for XP_011248313.1

      Conserved Domains (1) summary
      pfam14661
      Location:899
      HAUS6_N; HAUS augmin-like complex subunit 6 N-terminus

    RNA

    1. XR_390320.2 RNA Sequence

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