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    Haus6 HAUS augmin-like complex, subunit 6 [ Mus musculus (house mouse) ]

    Gene ID: 230376, updated on 23-Jun-2021

    Summary

    Official Symbol
    Haus6provided by MGI
    Official Full Name
    HAUS augmin-like complex, subunit 6provided by MGI
    Primary source
    MGI:MGI:1923389
    See related
    Ensembl:ENSMUSG00000038047
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D4Ertd27; D4Ertd27e; mKIAA1574; 9830144E06; 6230416J20Rik
    Expression
    Broad expression in CNS E11.5 (RPKM 5.7), liver E14 (RPKM 3.9) and 20 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Haus6 in Genome Data Viewer
    Location:
    4 C4; 4 40.69 cM
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (86497092..86530317, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (86578855..86612075, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (86227188..86257926, complement)

    Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene stabilizer of axonemal microtubules 1, opposite strand Neighboring gene Ras-related GTP binding A Neighboring gene small Cajal body-specific RNA 8 Neighboring gene perilipin 2 pseudogene Neighboring gene perilipin 2 Neighboring gene predicted gene, 42312

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables microtubule binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in centrosome cycle ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in microtubule cytoskeleton organization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in spindle assembly ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    part_of HAUS complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in centriolar satellite ISO
    Inferred from Sequence Orthology
    more info
     
    located_in centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in mitotic spindle microtubule IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in mitotic spindle microtubule ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nuclear speck ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    HAUS augmin-like complex subunit 6
    Names
    likely ortholog of H. sapiens family with sequence similarity 29, member A (FAM29A)

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173400.3NP_775576.2  HAUS augmin-like complex subunit 6

      See identical proteins and their annotated locations for NP_775576.2

      Status: VALIDATED

      Source sequence(s)
      AL824707, BB851382, BC068237, BX516644, BY471626
      Consensus CDS
      CCDS18307.1
      UniProtKB/TrEMBL
      Q6NV99
      Related
      ENSMUSP00000070504.8, ENSMUST00000070607.9
      Conserved Domains (1) summary
      pfam14661
      Location:15238
      HAUS6_N; HAUS augmin-like complex subunit 6 N-terminus

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000070.7 Reference GRCm39 C57BL/6J

      Range
      86497092..86530317 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006537875.4XP_006537938.1  HAUS augmin-like complex subunit 6 isoform X1

      Conserved Domains (1) summary
      pfam14661
      Location:17238
      HAUS6_N; HAUS augmin-like complex subunit 6 N-terminus
    2. XM_036163993.1XP_036019886.1  HAUS augmin-like complex subunit 6 isoform X3

      Conserved Domains (1) summary
      pfam14661
      Location:899
      HAUS6_N; HAUS augmin-like complex subunit 6 N-terminus
    3. XM_011250010.4XP_011248312.1  HAUS augmin-like complex subunit 6 isoform X2

      See identical proteins and their annotated locations for XP_011248312.1

      Conserved Domains (1) summary
      pfam14661
      Location:899
      HAUS6_N; HAUS augmin-like complex subunit 6 N-terminus
    4. XM_011250011.2XP_011248313.1  HAUS augmin-like complex subunit 6 isoform X2

      See identical proteins and their annotated locations for XP_011248313.1

      Conserved Domains (1) summary
      pfam14661
      Location:899
      HAUS6_N; HAUS augmin-like complex subunit 6 N-terminus
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