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    Slc35a3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3 [ Mus musculus (house mouse) ]

    Gene ID: 229782, updated on 9-Sep-2018

    Summary

    Official Symbol
    Slc35a3provided by MGI
    Official Full Name
    solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3provided by MGI
    Primary source
    MGI:MGI:1917648
    See related
    Ensembl:ENSMUSG00000027957 Vega:OTTMUSG00000029522
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2310050P13Rik
    Expression
    Ubiquitous expression in large intestine adult (RPKM 5.1), colon adult (RPKM 4.5) and 28 other tissues See more
    Orthologs

    Genomic context

    See Slc35a3 in Genome Data Viewer
    Location:
    3; 3 G1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 3 NC_000069.6 (116669469..116713741, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (116373716..116415198, complement)

    Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene tRNA methyltransferase 13 Neighboring gene SAS-6 centriolar assembly protein Neighboring gene major facilitator superfamily domain containing 14A Neighboring gene predicted gene, 40126 Neighboring gene amylo-1,6-glucosidase, 4-alpha-glucanotransferase Neighboring gene predicted gene, 40127

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Clone Names

    • MGC36317

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    pyrimidine nucleotide-sugar transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    UDP-N-acetylglucosamine transmembrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    carbohydrate transport IEA
    Inferred from Electronic Annotation
    more info
     
    pyrimidine nucleotide-sugar transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of Golgi membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    UDP-N-acetylglucosamine transporter
    Names
    golgi UDP-GlcNAc transporter

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001362374.1NP_001349303.1  UDP-N-acetylglucosamine transporter

      Status: VALIDATED

      Source sequence(s)
      AC131038, AK041195, AK049484, AK081236, AK161317
      Conserved Domains (1) summary
      pfam04142
      Location:1314
      Nuc_sug_transp; Nucleotide-sugar transporter
    2. NM_144902.4NP_659151.1  UDP-N-acetylglucosamine transporter

      See identical proteins and their annotated locations for NP_659151.1

      Status: VALIDATED

      Source sequence(s)
      AC131038, AC147242
      Consensus CDS
      CCDS17791.1
      UniProtKB/Swiss-Prot
      Q8R1T4
      Related
      ENSMUSP00000029569.2, OTTMUSP00000037839, ENSMUST00000029569.8
      Conserved Domains (1) summary
      pfam04142
      Location:1314
      Nuc_sug_transp; Nucleotide-sugar transporter

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000069.6 Reference GRCm38.p4 C57BL/6J

      Range
      116669469..116713741 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006501425.3XP_006501488.1  UDP-N-acetylglucosamine transporter isoform X1

      See identical proteins and their annotated locations for XP_006501488.1

      Conserved Domains (2) summary
      TIGR00803
      Location:98325
      nst; UDP-galactose transporter
      pfam04142
      Location:13326
      Nuc_sug_transp; Nucleotide-sugar transporter
    2. XM_006501427.2XP_006501490.1  UDP-N-acetylglucosamine transporter isoform X3

      Conserved Domains (1) summary
      TIGR00803
      Location:5232
      nst; UDP-galactose transporter
    3. XM_006501426.3XP_006501489.1  UDP-N-acetylglucosamine transporter isoform X2

      See identical proteins and their annotated locations for XP_006501489.1

      UniProtKB/Swiss-Prot
      Q8R1T4
      Conserved Domains (1) summary
      pfam04142
      Location:1314
      Nuc_sug_transp; Nucleotide-sugar transporter

    RNA

    1. XR_001783689.1 RNA Sequence

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