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    Smim26 small integral membrane protein 26 [ Mus musculus (house mouse) ]

    Gene ID: 228715, updated on 31-Jan-2019

    Summary

    Official Symbol
    Smim26provided by MGI
    Official Full Name
    small integral membrane protein 26provided by MGI
    Primary source
    MGI:MGI:2685407
    See related
    Ensembl:ENSMUSG00000074754
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm561
    Expression
    Broad expression in cerebellum adult (RPKM 15.7), bladder adult (RPKM 14.0) and 20 other tissues See more
    Orthologs

    Genomic context

    See Smim26 in Genome Data Viewer
    Location:
    2; 2 G1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (144594065..144595365)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (144419801..144421101)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene retinoblastoma binding protein 9, serine hydrolase Neighboring gene predicted gene, 34292 Neighboring gene SEC23 homolog B, COPII coat complex component Neighboring gene D-tyrosyl-tRNA deacylase 1 Neighboring gene CWC22 spliceosome-associated protein homolog pseudogene Neighboring gene predicted gene, 39951

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    mitochondrion HDA PubMed 

    General protein information

    Preferred Names
    uncharacterized protein LOC228715

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033297.3NP_001028469.1  uncharacterized protein LOC228715

      See identical proteins and their annotated locations for NP_001028469.1

      Status: VALIDATED

      Source sequence(s)
      AK002610, AK010324, BF457771
      Consensus CDS
      CCDS16823.1
      UniProtKB/TrEMBL
      Q3V460
      Related
      ENSMUSP00000132193.1, ENSMUST00000136628.1

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      144594065..144595365
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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