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    Spout1 SPOUT domain containing methyltransferase 1 [ Mus musculus (house mouse) ]

    Gene ID: 227695, updated on 31-Jan-2019

    Summary

    Official Symbol
    Spout1provided by MGI
    Official Full Name
    SPOUT domain containing methyltransferase 1provided by MGI
    Primary source
    MGI:MGI:106544
    See related
    Ensembl:ENSMUSG00000039660
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CENP-32; AL033358; D2Wsu81e; 9930028P05
    Expression
    Ubiquitous expression in testis adult (RPKM 60.1), limb E14.5 (RPKM 21.2) and 28 other tissues See more
    Orthologs

    Genomic context

    See Spout1 in Genome Data Viewer
    Location:
    2 B; 2 21.29 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 2 NC_000068.7 (30173447..30178495, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (30028967..30033975, complement)

    Chromosome 2 - NC_000068.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 39 (zinc transporter), member 1, pseudogene Neighboring gene predicted gene, 31080 Neighboring gene endonuclease G Neighboring gene kynurenine aminotransferase 1 Neighboring gene predicted gene, 31201 Neighboring gene RIKEN cDNA 1700084E18 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC90552

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    miRNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    cell division IEA
    Inferred from Electronic Annotation
    more info
     
    maintenance of centrosome location ISO
    Inferred from Sequence Orthology
    more info
     
    methylation IEA
    Inferred from Electronic Annotation
    more info
     
    posttranscriptional regulation of gene expression ISO
    Inferred from Sequence Orthology
    more info
     
    production of miRNAs involved in gene silencing by miRNA ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    chromosome IEA
    Inferred from Electronic Annotation
    more info
     
    chromosome, centromeric region IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    kinetochore ISO
    Inferred from Sequence Orthology
    more info
     
    mitotic spindle ISO
    Inferred from Sequence Orthology
    more info
     
    spindle pole centrosome ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    putative methyltransferase C9orf114 homolog
    Names
    centromere protein 32
    kinetochore-associated protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172660.4NP_766248.3  putative methyltransferase C9orf114 homolog

      See identical proteins and their annotated locations for NP_766248.3

      Status: VALIDATED

      Source sequence(s)
      AK147162, BY289934, BY462424
      Consensus CDS
      CCDS15873.2
      UniProtKB/Swiss-Prot
      Q3UHX9
      Related
      ENSMUSP00000097793.4, ENSMUST00000100220.4
      Conserved Domains (1) summary
      pfam02598
      Location:76365
      Methyltrn_RNA_3; Putative RNA methyltransferase

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000068.7 Reference GRCm38.p4 C57BL/6J

      Range
      30173447..30178495 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_866012.2 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NR_030685.1: Suppressed sequence

      Description
      NR_030685.1: This RefSeq was permanently suppressed because the transcript is incompletely processed at its 5'' end.
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