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    Wdr26 WD repeat domain 26 [ Mus musculus (house mouse) ]

    Gene ID: 226757, updated on 23-Jun-2021

    Summary

    Official Symbol
    Wdr26provided by MGI
    Official Full Name
    WD repeat domain 26provided by MGI
    Primary source
    MGI:MGI:1923825
    See related
    Ensembl:ENSMUSG00000038733
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gid; Gid7; C77982; AA693241; AI447817; AU044014; 1600024A01Rik
    Expression
    Ubiquitous expression in liver E14 (RPKM 34.5), liver E14.5 (RPKM 31.1) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Wdr26 in Genome Data Viewer
    Location:
    1; 1 H4
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (181000791..181046211, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (181173226..181220921, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (183103357..183142109, complement)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor receptor 3, pseudogene Neighboring gene nuclear VCP-like Neighboring gene cornichon family AMPA receptor auxiliary protein 4 Neighboring gene predicted gene, 50602 Neighboring gene predicted gene, 38664 Neighboring gene ribosomal protein L35A, pseudogene 2 Neighboring gene HAUS augmin-like complex, subunit 5 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    part_of ubiquitin ligase complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    WD repeat-containing protein 26

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145514.5NP_663489.4  WD repeat-containing protein 26

      See identical proteins and their annotated locations for NP_663489.4

      Status: VALIDATED

      Source sequence(s)
      AC113084, AK075743, AK082326, BM899217
      Consensus CDS
      CCDS15583.2
      UniProtKB/Swiss-Prot
      Q8C6G8
      Related
      ENSMUSP00000124592.2, ENSMUST00000162819.9
      Conserved Domains (4) summary
      smart00668
      Location:136211
      CTLH; C-terminal to LisH motif
      COG2319
      Location:326621
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:329621
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:339379
      7WD40; WD40 repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      181000791..181046211 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006496817.5XP_006496880.1  WD repeat-containing protein 26 isoform X2

      UniProtKB/TrEMBL
      E0CYH4
      Related
      ENSMUSP00000124186.2, ENSMUST00000162963.8
      Conserved Domains (4) summary
      smart00668
      Location:136195
      CTLH; C-terminal to LisH motif
      cd00200
      Location:313605
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:323363
      7WD40; WD40 repeat [structural motif]
      pfam17814
      Location:106133
      LisH_TPL; LisH-like dimerisation domain
    2. XM_030253521.2XP_030109381.1  WD repeat-containing protein 26 isoform X3

      Conserved Domains (2) summary
      cd00200
      Location:139431
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:149189
      7WD40; WD40 repeat [structural motif]
    3. XM_006496816.5XP_006496879.1  WD repeat-containing protein 26 isoform X1

      Conserved Domains (4) summary
      smart00668
      Location:136211
      CTLH; C-terminal to LisH motif
      cd00200
      Location:329621
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:339379
      7WD40; WD40 repeat [structural motif]
      pfam17814
      Location:106133
      LisH_TPL; LisH-like dimerisation domain

    RNA

    1. XR_373605.5 RNA Sequence

    2. XR_004941928.1 RNA Sequence

    3. XR_373606.5 RNA Sequence

    4. XR_003954940.2 RNA Sequence

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