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    Cnst consortin, connexin sorting protein [ Mus musculus (house mouse) ]

    Gene ID: 226744, updated on 23-Jun-2021

    Summary

    Official Symbol
    Cnstprovided by MGI
    Official Full Name
    consortin, connexin sorting proteinprovided by MGI
    Primary source
    MGI:MGI:2445141
    See related
    Ensembl:ENSMUSG00000038949
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    9630058J23Rik
    Expression
    Ubiquitous expression in cerebellum adult (RPKM 11.4), heart adult (RPKM 11.2) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Cnst in Genome Data Viewer
    Location:
    1; 1 H4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (179374009..179455043)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (179546444..179627478)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (181476660..181557604)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene ribosomal protein L29 pseudogene Neighboring gene transcription factor B2, mitochondrial Neighboring gene saccharopine dehydrogenase (putative) Neighboring gene kinesin family member 28 Neighboring gene AT hook containing transcription factor 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Clone Names

    • MGC31547

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables connexin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables connexin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables phosphatase binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in trans-Golgi network IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in trans-Golgi network ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in transport vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in transport vesicle ISO
    Inferred from Sequence Orthology
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_146105.3NP_666217.2  consortin

      See identical proteins and their annotated locations for NP_666217.2

      Status: PROVISIONAL

      Source sequence(s)
      BC054802
      Consensus CDS
      CCDS15562.1
      UniProtKB/Swiss-Prot
      Q8CBC4
      Related
      ENSMUSP00000048205.9, ENSMUST00000040706.9
      Conserved Domains (1) summary
      pfam15281
      Location:598709
      Consortin_C; Consortin C-terminus

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      179374009..179455043
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006496799.4XP_006496862.1  consortin isoform X1

      Conserved Domains (1) summary
      cl20010
      Location:598643
      Consortin_C; Consortin C-terminus
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