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    Cnst consortin, connexin sorting protein [ Mus musculus (house mouse) ]

    Gene ID: 226744, updated on 11-Mar-2018

    Summary

    Official Symbol
    Cnstprovided by MGI
    Official Full Name
    consortin, connexin sorting proteinprovided by MGI
    Primary source
    MGI:MGI:2445141
    See related
    Ensembl:ENSMUSG00000038949 Vega:OTTMUSG00000022551
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    9630058J23Rik
    Expression
    Ubiquitous expression in cerebellum adult (RPKM 11.4), heart adult (RPKM 11.2) and 28 other tissues See more
    Orthologs

    Genomic context

    See Cnst in Genome Data Viewer
    Location:
    1; 1 H4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (179546346..179627473)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (181476660..181557604)

    Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene ribosomal protein L29 pseudogene Neighboring gene transcription factor B2, mitochondrial Neighboring gene saccharopine dehydrogenase (putative) Neighboring gene kinesin family member 28 Neighboring gene AT hook containing transcription factor 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Homology

    Clone Names

    • MGC31547

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    connexin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    phosphatase binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    negative regulation of phosphatase activity ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of Golgi to plasma membrane protein transport ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     
    trans-Golgi network ISO
    Inferred from Sequence Orthology
    more info
     
    transport vesicle ISO
    Inferred from Sequence Orthology
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_146105.3NP_666217.2  consortin

      See identical proteins and their annotated locations for NP_666217.2

      Status: PROVISIONAL

      Source sequence(s)
      BC054802
      Consensus CDS
      CCDS15562.1
      UniProtKB/Swiss-Prot
      Q8CBC4
      Related
      ENSMUSP00000048205.8, OTTMUSP00000025723, ENSMUST00000040706.8, OTTMUST00000054013
      Conserved Domains (1) summary
      pfam15281
      Location:598709
      Consortin_C; Consortin C-terminus

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

      Range
      179546346..179627473
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006496799.3XP_006496862.1  consortin isoform X1

      Conserved Domains (1) summary
      cl20010
      Location:598643
      Consortin_C; Consortin C-terminus
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