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    AW554918 expressed sequence AW554918 [ Mus musculus (house mouse) ]

    Gene ID: 225289, updated on 17-Mar-2019

    Summary

    Official Symbol
    AW554918provided by MGI
    Official Full Name
    expressed sequence AW554918provided by MGI
    Primary source
    MGI:MGI:2147376
    See related
    Ensembl:ENSMUSG00000033632
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AI461742; Kiaa1328; mKIAA1328; 4921538P22
    Expression
    Broad expression in testis adult (RPKM 4.2), CNS E14 (RPKM 1.5) and 23 other tissues See more
    Orthologs

    Genomic context

    See AW554918 in Genome Data Viewer
    Location:
    18; 18 A2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 18 NC_000084.6 (25168998..25467321)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (25327521..25625822)

    Chromosome 18 - NC_000084.6Genomic Context describing neighboring genes Neighboring gene molybdenum cofactor sulfurase Neighboring gene formin homology 2 domain containing 3 Neighboring gene tubulin polyglutamylase complex subunit 2 Neighboring gene predicted gene, 41678 Neighboring gene predicted gene, 32825 Neighboring gene CUGBP, Elav-like family member 4 Neighboring gene predicted gene, 32896

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • KIAA1328

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033532.3NP_001028704.2  protein hinderin

      See identical proteins and their annotated locations for NP_001028704.2

      Status: VALIDATED

      Source sequence(s)
      AK167257, AK220161, BC066089, CA328813
      UniProtKB/Swiss-Prot
      Q6NZK5
      Related
      ENSMUSP00000095248.3, ENSMUST00000097643.9
      Conserved Domains (1) summary
      pfam15369
      Location:92414
      KIAA1328; uncharacterized protein KIAA1328

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000084.6 Reference GRCm38.p4 C57BL/6J

      Range
      25168998..25467321
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006525833.3XP_006525896.2  protein hinderin isoform X3

      UniProtKB/TrEMBL
      E9QPX6
      Related
      ENSMUSP00000046227.7, ENSMUST00000036619.13
      Conserved Domains (1) summary
      pfam15369
      Location:92414
      KIAA1328; uncharacterized protein KIAA1328
    2. XM_017317877.1XP_017173366.1  protein hinderin isoform X2

    3. XM_017317880.1XP_017173369.1  protein hinderin isoform X6

    4. XM_017317878.1XP_017173367.1  protein hinderin isoform X4

    5. XM_017317881.1XP_017173370.1  protein hinderin isoform X7

    6. XM_017317882.1XP_017173371.1  protein hinderin isoform X8

    7. XM_017317883.1XP_017173372.1  protein hinderin isoform X9

    8. XM_017317879.1XP_017173368.1  protein hinderin isoform X5

    9. XM_017317876.1XP_017173365.1  protein hinderin isoform X1

    10. XM_017317884.1XP_017173373.1  protein hinderin isoform X10

    RNA

    1. XR_001782355.1 RNA Sequence

    2. XR_001782354.1 RNA Sequence

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