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    Rsl24d1 ribosomal L24 domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 225215, updated on 23-Jun-2021

    Summary

    Official Symbol
    Rsl24d1provided by MGI
    Official Full Name
    ribosomal L24 domain containing 1provided by MGI
    Primary source
    MGI:MGI:2681840
    See related
    Ensembl:ENSMUSG00000032215
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2410159K22Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 36.0), CNS E18 (RPKM 21.4) and 25 other tissues See more
    Orthologs
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    Genomic context

    See Rsl24d1 in Genome Data Viewer
    Location:
    9; 9 D
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (73020751..73030615)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (73113469..73123333)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (72961276..72971140)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene RAB27A, member RAS oncogene family Neighboring gene KH domain containing 3, subcortical maternal complex member Neighboring gene ribosomal protein L36 pseudogene Neighboring gene predicted gene 27211

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Clone Names

    • MGC6735

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in ribosomal large subunit biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    probable ribosome biogenesis protein RLP24
    Names
    60S ribosomal protein L30 isolog
    ribosomal L24 domain-containing protein 1
    NP_941011.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_198609.2NP_941011.1  probable ribosome biogenesis protein RLP24

      See identical proteins and their annotated locations for NP_941011.1

      Status: PROVISIONAL

      Source sequence(s)
      AC157513
      Consensus CDS
      CCDS40688.1
      UniProtKB/Swiss-Prot
      Q99L28
      UniProtKB/TrEMBL
      Q5EBK7
      Related
      ENSMUSP00000034738.8, ENSMUST00000034738.14
      Conserved Domains (1) summary
      pfam01246
      Location:266
      Ribosomal_L24e; Ribosomal protein L24e

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      73020751..73030615
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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