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    E330017A01Rik RIKEN cDNA E330017A01 gene [ Mus musculus (house mouse) ]

    Gene ID: 224247, updated on 23-May-2018

    Summary

    Official Symbol
    E330017A01Rikprovided by MGI
    Official Full Name
    RIKEN cDNA E330017A01 geneprovided by MGI
    Primary source
    MGI:MGI:3045360
    See related
    Ensembl:ENSMUSG00000055789 Vega:OTTMUSG00000036766
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more

    Genomic context

    See E330017A01Rik in Genome Data Viewer
    Location:
    16; 16 C1.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 16 NC_000082.6 (58635262..58638403, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (58635375..58638516, complement)

    Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 20942 Neighboring gene predicted gene 813 Neighboring gene predicted gene, 41464 Neighboring gene coproporphyrinogen oxidase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Clone Names

    • MGC117520

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    ferric iron binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    ferrous iron binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    ferroxidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    identical protein binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    iron ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    intracellular sequestering of iron ion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    uncharacterized protein LOC224247

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_175011.2NP_778176.1  uncharacterized protein LOC224247

      See identical proteins and their annotated locations for NP_778176.1

      Status: PREDICTED

      Source sequence(s)
      AK087761
      Consensus CDS
      CCDS28232.1
      UniProtKB/TrEMBL
      Q8BU47
      Related
      ENSMUSP00000056475.8, OTTMUSP00000052445, ENSMUST00000053249.8, OTTMUST00000094342
      Conserved Domains (2) summary
      cd01056
      Location:8177
      Euk_Ferritin; eukaryotic ferritins
      pfam00210
      Location:13145
      Ferritin; Ferritin-like domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000082.6 Reference GRCm38.p4 C57BL/6J

      Range
      58635262..58638403 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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