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    5031439G07Rik RIKEN cDNA 5031439G07 gene [ Mus musculus (house mouse) ]

    Gene ID: 223739, updated on 2-Nov-2024

    Summary

    Official Symbol
    5031439G07Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 5031439G07 geneprovided by MGI
    Primary source
    MGI:MGI:2444899
    See related
    Ensembl:ENSMUSG00000036046 AllianceGenome:MGI:2444899
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    mKIAA0930
    Summary
    Is expressed in nervous system and neural retina. Orthologous to human KIAA0930 (KIAA0930). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in cerebellum adult (RPKM 23.5), CNS E18 (RPKM 16.8) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See 5031439G07Rik in Genome Data Viewer
    Location:
    15 E2; 15 40.25 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (84828137..84872503, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (84943936..84987971, complement)

    Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930513L16 gene Neighboring gene predicted gene 29666 Neighboring gene STARR-positive B cell enhancer ABC_E8603 Neighboring gene nucleoporin 50 Neighboring gene microRNA 1249 Neighboring gene predicted gene, 39558 Neighboring gene SET translocation pseudogene Neighboring gene predicted gene, 52194 Neighboring gene uroplakin 3A

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein KIAA0930 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033273.3NP_001028445.2  uncharacterized protein KIAA0930 homolog isoform 2

      Status: VALIDATED

      Source sequence(s)
      AL513352
      Consensus CDS
      CCDS27715.2
      UniProtKB/Swiss-Prot
      Q3TCU3, Q3UE31
      UniProtKB/TrEMBL
      Q69ZV3
      Related
      ENSMUSP00000037011.7, ENSMUST00000047144.13
      Conserved Domains (1) summary
      pfam09741
      Location:30258
      DUF2045; Uncharacterized conserved protein (DUF2045)
    2. NM_001368660.1NP_001355589.1  uncharacterized protein KIAA0930 homolog isoform 1

      Status: VALIDATED

      Source sequence(s)
      AL513352
      UniProtKB/TrEMBL
      Q69ZV3
      Conserved Domains (1) summary
      pfam09741
      Location:37265
      DUF2045; Uncharacterized conserved protein (DUF2045)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000081.7 Reference GRCm39 C57BL/6J

      Range
      84828137..84872503 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036159359.1XP_036015252.1  uncharacterized protein KIAA0930 homolog isoform X1

      UniProtKB/TrEMBL
      Q69ZV3
      Conserved Domains (1) summary
      pfam09741
      Location:1224
      DUF2045; Uncharacterized conserved protein (DUF2045)