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    Oxnad1 oxidoreductase NAD-binding domain containing 1 [ Mus musculus (house mouse) ]

    Gene ID: 218885, updated on 9-Sep-2018

    Summary

    Official Symbol
    Oxnad1provided by MGI
    Official Full Name
    oxidoreductase NAD-binding domain containing 1provided by MGI
    Primary source
    MGI:MGI:1916953
    See related
    Ensembl:ENSMUSG00000021906 Vega:OTTMUSG00000035379
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AW492292; BC019806; 2410002F01Rik
    Expression
    Ubiquitous expression in heart adult (RPKM 5.4), kidney adult (RPKM 4.1) and 28 other tissues See more
    Orthologs

    Genomic context

    See Oxnad1 in Genome Data Viewer
    Location:
    14; 14 B
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (32085628..32103203)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (32898914..32916389)

    Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 41125 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 15 Neighboring gene diphthamine biosynthesis 3 Neighboring gene predicted gene, 41127 Neighboring gene beta-microseminoprotein Neighboring gene eukaryotic translation initiation factor 5 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC30933

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    oxidation-reduction process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    mitochondrion HDA PubMed 

    General protein information

    Preferred Names
    oxidoreductase NAD-binding domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145460.2NP_663435.2  oxidoreductase NAD-binding domain-containing protein 1 precursor

      See identical proteins and their annotated locations for NP_663435.2

      Status: VALIDATED

      Source sequence(s)
      AC154846
      Consensus CDS
      CCDS26918.1
      UniProtKB/Swiss-Prot
      Q8VE38
      Related
      ENSMUSP00000022462.7, OTTMUSP00000049594, ENSMUST00000022462.13, OTTMUST00000090409
      Conserved Domains (1) summary
      cd00322
      Location:69308
      FNR_like; Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

      Range
      32085628..32103203
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017315962.1XP_017171451.1  oxidoreductase NAD-binding domain-containing protein 1 isoform X1

    RNA

    1. XR_874343.2 RNA Sequence

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