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    Arl15 ADP-ribosylation factor-like 15 [ Mus musculus (house mouse) ]

    Gene ID: 218639, updated on 31-Jan-2019

    Summary

    Official Symbol
    Arl15provided by MGI
    Official Full Name
    ADP-ribosylation factor-like 15provided by MGI
    Primary source
    MGI:MGI:2442308
    See related
    Ensembl:ENSMUSG00000042348
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Arfrp2; A430036I03; C230032K13Rik
    Expression
    Ubiquitous expression in CNS E14 (RPKM 3.6), CNS E18 (RPKM 3.3) and 28 other tissues See more
    Orthologs

    Genomic context

    See Arl15 in Genome Data Viewer
    Location:
    13; 13 D2.2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (113794508..114157462)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (114584716..114947669)

    Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 31276 Neighboring gene GC-rich promoter binding protein 1-like 1 pseudogene Neighboring gene RIKEN cDNA A430090L17 gene Neighboring gene predicted gene, 41072 Neighboring gene NADH:ubiquinone oxidoreductase core subunit S4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    ADP-ribosylation factor-like protein 15
    Names
    ADP-ribosylation factor related protein 2
    ARF-related protein 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172595.4NP_766183.1  ADP-ribosylation factor-like protein 15

      See identical proteins and their annotated locations for NP_766183.1

      Status: VALIDATED

      Source sequence(s)
      AK039965, AK048736, BX514024, CJ063085, CJ066332
      Consensus CDS
      CCDS36785.1
      UniProtKB/Swiss-Prot
      Q8BGR6
      Related
      ENSMUSP00000088740.6, ENSMUST00000091201.6
      Conserved Domains (2) summary
      COG1100
      Location:31197
      Gem1; GTPase SAR1 family domain [General function prediction only]
      cl21455
      Location:34193
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

      Range
      113794508..114157462
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006517629.3XP_006517692.1  ADP-ribosylation factor-like protein 15 isoform X3

      Conserved Domains (2) summary
      COG1100
      Location:31164
      Gem1; GTPase SAR1 family domain [General function prediction only]
      cl21455
      Location:34165
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    2. XM_006517630.3XP_006517693.1  ADP-ribosylation factor-like protein 15 isoform X4

      See identical proteins and their annotated locations for XP_006517693.1

      UniProtKB/TrEMBL
      B7ZN40
      Related
      ENSMUSP00000153127.1, ENSMUST00000224068.1
      Conserved Domains (2) summary
      COG1100
      Location:31177
      Gem1; GTPase SAR1 family domain [General function prediction only]
      cl21455
      Location:34173
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    3. XM_011244655.2XP_011242957.1  ADP-ribosylation factor-like protein 15 isoform X2

      Conserved Domains (2) summary
      COG1100
      Location:23189
      Gem1; GTPase SAR1 family domain [General function prediction only]
      cl21455
      Location:26185
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    4. XM_006517628.3XP_006517691.1  ADP-ribosylation factor-like protein 15 isoform X1

      Conserved Domains (2) summary
      COG1100
      Location:31197
      Gem1; GTPase SAR1 family domain [General function prediction only]
      cl21455
      Location:34193
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
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