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    Mrps27 mitochondrial ribosomal protein S27 [ Mus musculus (house mouse) ]

    Gene ID: 218506, updated on 12-Aug-2018

    Summary

    Official Symbol
    Mrps27provided by MGI
    Official Full Name
    mitochondrial ribosomal protein S27provided by MGI
    Primary source
    MGI:MGI:1919064
    See related
    Ensembl:ENSMUSG00000041632
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2610028H14Rik
    Expression
    Ubiquitous expression in heart adult (RPKM 13.1), CNS E11.5 (RPKM 12.5) and 28 other tissues See more
    Orthologs

    Genomic context

    See Mrps27 in Genome Data Viewer
    Location:
    13; 13 D1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (99344767..99415562)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (100114741..100185516)

    Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene zinc finger protein 366 Neighboring gene pentatricopeptide repeat domain 2 Neighboring gene predicted gene, 41038 Neighboring gene RIKEN cDNA 6430562O15 gene Neighboring gene predicted gene, 41037 Neighboring gene microtubule-associated protein 1B Neighboring gene predicted gene, 26559

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrial ribosome binding ISO
    Inferred from Sequence Orthology
    more info
     
    rRNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    tRNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    cell proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of mitochondrial translation ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrial small ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrion HDA PubMed 
    mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mitochondrion ISO
    Inferred from Sequence Orthology
    more info
     
    ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    28S ribosomal protein S27, mitochondrial
    Names
    MRP-S27
    S27mt
    mrps27

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_173757.3NP_776118.2  28S ribosomal protein S27, mitochondrial

      See identical proteins and their annotated locations for NP_776118.2

      Status: VALIDATED

      Source sequence(s)
      AA461997, AK076008, AK087686
      Consensus CDS
      CCDS26722.1
      UniProtKB/Swiss-Prot
      Q8BK72
      Related
      ENSMUSP00000062326.5, ENSMUST00000052249.6
      Conserved Domains (2) summary
      sd00004
      Location:111135
      PPR; PPR repeat [structural motif]
      pfam10037
      Location:1412
      MRP-S27; Mitochondrial 28S ribosomal protein S27

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

      Range
      99344767..99415562
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006517602.1XP_006517665.1  28S ribosomal protein S27, mitochondrial isoform X1

      Conserved Domains (2) summary
      sd00004
      Location:182212
      PPR; PPR repeat [structural motif]
      pfam10037
      Location:1453
      MRP-S27; Mitochondrial 28S ribosomal protein S27
    2. XM_017315495.1XP_017170984.1  28S ribosomal protein S27, mitochondrial isoform X2

    3. XM_017315496.1XP_017170985.1  28S ribosomal protein S27, mitochondrial isoform X3

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