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    Ppp2r5d protein phosphatase 2, regulatory subunit B', delta [ Mus musculus (house mouse) ]

    Gene ID: 21770, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ppp2r5dprovided by MGI
    Official Full Name
    protein phosphatase 2, regulatory subunit B', deltaprovided by MGI
    Primary source
    MGI:MGI:2388481
    See related
    Ensembl:ENSMUSG00000059409
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    B'del; Tex271; B'delta; TEG-271
    Expression
    Ubiquitous expression in large intestine adult (RPKM 36.1), CNS E11.5 (RPKM 34.1) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Ppp2r5d in Genome Data Viewer
    Location:
    17 22.9 cM; 17 C
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (46993917..47015952, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (46682991..46705026, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (46819940..46841951, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene ribosomal RNA processing 36 Neighboring gene kelch domain containing 3 Neighboring gene male enhanced antigen 1 Neighboring gene peroxisomal biogenesis factor 6 Neighboring gene glycine N-methyltransferase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables phosphoprotein phosphatase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein phosphatase activator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of protein phosphatase type 2A complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform
    Names
    testis expressed gene 271

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001357684.1NP_001344613.1  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform 2

      Status: VALIDATED

      Source sequence(s)
      BE948258, CT030702
      Consensus CDS
      CCDS89107.1
      Related
      ENSMUSP00000156500.2, ENSMUST00000233988.2
      Conserved Domains (2) summary
      pfam01603
      Location:101506
      B56; Protein phosphatase 2A regulatory B subunit (B56 family)
      cl27532
      Location:49115
      B56; Protein phosphatase 2A regulatory B subunit (B56 family)
    2. NM_009358.3NP_033384.2  serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform isoform 1

      See identical proteins and their annotated locations for NP_033384.2

      Status: VALIDATED

      Source sequence(s)
      AK160587, CJ042073, CT030702
      Consensus CDS
      CCDS28836.1
      UniProtKB/TrEMBL
      Q91V89
      Related
      ENSMUSP00000002839.9, ENSMUST00000002839.9
      Conserved Domains (2) summary
      pfam01603
      Location:100505
      B56; Protein phosphatase 2A regulatory B subunit (B56 family)
      cl27532
      Location:48114
      B56; Protein phosphatase 2A regulatory B subunit (B56 family)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      46993917..47015952 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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