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    Tex264 testis expressed gene 264 [ Mus musculus (house mouse) ]

    Gene ID: 21767, updated on 23-Jun-2021

    Summary

    Official Symbol
    Tex264provided by MGI
    Official Full Name
    testis expressed gene 264provided by MGI
    Primary source
    MGI:MGI:1096570
    See related
    Ensembl:ENSMUSG00000040813
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    TEG-264
    Expression
    Ubiquitous expression in adrenal adult (RPKM 59.7), kidney adult (RPKM 57.5) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Tex264 in Genome Data Viewer
    Location:
    9; 9 F1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (106535945..106563151, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (106658746..106685952, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (106561077..106588279, complement)

    Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene predicted gene 28111 Neighboring gene glutamate receptor, metabotropic 2 Neighboring gene RAD54 like 2 (S. cerevisiae) Neighboring gene DDB1 and CUL4 associated factor 1 Neighboring gene RNA binding motif protein 15B

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables signaling receptor activity ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA repair IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within autophagy IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within cellular response to DNA damage stimulus IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein-DNA covalent cross-linking repair IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in protein-DNA covalent cross-linking repair ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in reticulophagy IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    acts_upstream_of_or_within reticulophagy ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    involved_in reticulophagy ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in autophagosome membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in autophagosome membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in autophagosome membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in chromosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in endoplasmic reticulum membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in replication fork IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in replication fork ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    testis-expressed protein 264 homolog
    Names
    testis-expressed protein 264

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081654.2NP_001075123.1  testis-expressed protein 264 homolog

      See identical proteins and their annotated locations for NP_001075123.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1, 2, and 3 encode the same protein.
      Source sequence(s)
      AK003113, AK009326, BU700575, BY096844
      Consensus CDS
      CCDS23483.1
      UniProtKB/TrEMBL
      E9Q137, Q9D7D9
      Related
      ENSMUSP00000044654.5, ENSMUST00000046735.11
      Conserved Domains (1) summary
      cl01368
      Location:45112
      GyrI-like; GyrI-like small molecule binding domain
    2. NM_001286498.1NP_001273427.1  testis-expressed protein 264 homolog

      See identical proteins and their annotated locations for NP_001273427.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR, compared to variant 1. Variants 1, 2, and 3 encode the same protein.
      Source sequence(s)
      AK009326, AK159046, BU700575, BY096844, BY331401
      Consensus CDS
      CCDS23483.1
      UniProtKB/TrEMBL
      E9Q137, Q3TXY2, Q9D7D9
      Related
      ENSMUSP00000133194.3, ENSMUST00000169068.8
      Conserved Domains (1) summary
      cl01368
      Location:45112
      GyrI-like; GyrI-like small molecule binding domain
    3. NM_011573.3NP_035703.2  testis-expressed protein 264 homolog

      See identical proteins and their annotated locations for NP_035703.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, and 3 encode the same protein.
      Source sequence(s)
      AC125188, AK009326, AK159046, BU700575
      Consensus CDS
      CCDS23483.1
      UniProtKB/TrEMBL
      E9Q137, Q3TXY2, Q9D7D9
      Related
      ENSMUSP00000132247.2, ENSMUST00000163441.8
      Conserved Domains (1) summary
      cl01368
      Location:45112
      GyrI-like; GyrI-like small molecule binding domain

    RNA

    1. NR_104459.1 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) lacks an alternate internal exon, compared to variant 1. This variant is represented as non-coding because the predicted protein does not meet RefSeq quality criteria.
      Source sequence(s)
      AK009326, BU700575, BY096844, DV656490

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000075.7 Reference GRCm39 C57BL/6J

      Range
      106535945..106563151 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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