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    Nol10 nucleolar protein 10 [ Mus musculus (house mouse) ]

    Gene ID: 217431, updated on 9-Sep-2018

    Summary

    Official Symbol
    Nol10provided by MGI
    Official Full Name
    nucleolar protein 10provided by MGI
    Primary source
    MGI:MGI:2684913
    See related
    Ensembl:ENSMUSG00000061458
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm67
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 8.6), CNS E14 (RPKM 5.4) and 27 other tissues See more
    Orthologs

    Genomic context

    See Nol10 in Genome Data Viewer
    Location:
    12; 12 A1.1
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 12 NC_000078.6 (17348447..17430095)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (17355299..17436901)

    Chromosome 12 - NC_000078.6Genomic Context describing neighboring genes Neighboring gene protein disulfide isomerase associated 6 Neighboring gene ATPase, H+ transporting, lysosomal V1 subunit C2 Neighboring gene predicted gene, 46336 Neighboring gene microRNA 3066 Neighboring gene predicted gene, 36752 Neighboring gene predicted gene, 46325

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC113734

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    small-subunit processome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001008421.1NP_001008421.1  nucleolar protein 10

      See identical proteins and their annotated locations for NP_001008421.1

      Status: PROVISIONAL

      Source sequence(s)
      BC086676
      Consensus CDS
      CCDS25828.1
      UniProtKB/Swiss-Prot
      Q5RJG1
      UniProtKB/TrEMBL
      Q3TUB5
      Related
      ENSMUSP00000035930.10, ENSMUST00000046011.11
      Conserved Domains (4) summary
      COG2319
      Location:56312
      WD40; WD40 repeat [General function prediction only]
      pfam08159
      Location:482508
      NUC153; NUC153 domain
      sd00039
      Location:5595
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:182339
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000078.6 Reference GRCm38.p4 C57BL/6J

      Range
      17348447..17430095
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017315015.1XP_017170504.1  nucleolar protein 10 isoform X1

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