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    Edrf1 erythroid differentiation regulatory factor 1 [ Mus musculus (house mouse) ]

    Gene ID: 214764, updated on 31-Jan-2019

    Summary

    Official Symbol
    Edrf1provided by MGI
    Official Full Name
    erythroid differentiation regulatory factor 1provided by MGI
    Primary source
    MGI:MGI:1919831
    See related
    Ensembl:ENSMUSG00000039990
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AU022667; AW558805; 2700050L05Rik
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 5.7), CNS E14 (RPKM 5.2) and 28 other tissues See more
    Orthologs

    Genomic context

    See Edrf1 in Genome Data Viewer
    Location:
    7; 7 F3
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (133637532..133673017)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (140829358..140864700)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene testis expressed 36 Neighboring gene predicted gene, 35625 Neighboring gene matrix metallopeptidase 21 Neighboring gene uroporphyrinogen III synthase Neighboring gene BRCA2 and CDKN1A interacting protein

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • MGC27934, MGC58090

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    positive regulation of transcription, DNA-templated ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    erythroid differentiation-related factor 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178115.4NP_835216.3  erythroid differentiation-related factor 1

      See identical proteins and their annotated locations for NP_835216.3

      Status: VALIDATED

      Source sequence(s)
      AU024266, BC072596, CJ078287
      Consensus CDS
      CCDS21932.2
      UniProtKB/Swiss-Prot
      Q6GQV7
      UniProtKB/TrEMBL
      E9Q9F9
      Related
      ENSMUSP00000059166.6, ENSMUST00000051169.12

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      133637532..133673017
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006507558.3XP_006507621.1  erythroid differentiation-related factor 1 isoform X1

    2. XM_006507559.3XP_006507622.1  erythroid differentiation-related factor 1 isoform X2

      See identical proteins and their annotated locations for XP_006507622.1

      UniProtKB/TrEMBL
      D3YZE7
      Related
      ENSMUSP00000115641.2, ENSMUST00000128901.8

    RNA

    1. XR_378229.3 RNA Sequence

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_145995.1: Suppressed sequence

      Description
      NM_145995.1: This RefSeq was temporarily suppressed because the CDS was partial.
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