Format

Send to:

Choose Destination
    • Showing Current items.

    9530068E07Rik RIKEN cDNA 9530068E07 gene [ Mus musculus (house mouse) ]

    Gene ID: 213673, updated on 31-Jan-2019

    Summary

    Official Symbol
    9530068E07Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 9530068E07 geneprovided by MGI
    Primary source
    MGI:MGI:2654705
    See related
    Ensembl:ENSMUSG00000036275
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Kct2; C85061
    Expression
    Ubiquitous expression in ovary adult (RPKM 94.8), kidney adult (RPKM 89.0) and 28 other tissues See more
    Orthologs

    Genomic context

    See 9530068E07Rik in Genome Data Viewer
    Location:
    11; 11 B1.3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 11 NC_000077.6 (52396428..52408723)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (52209930..52222225)

    Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 30217 Neighboring gene voltage-dependent anion channel 1 Neighboring gene predicted gene 12209 Neighboring gene 40S ribosomal protein S28 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC28751

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    keratinocyte-associated transmembrane protein 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_153117.2NP_694757.1  keratinocyte-associated transmembrane protein 2 precursor

      See identical proteins and their annotated locations for NP_694757.1

      Status: PROVISIONAL

      Source sequence(s)
      AK079269
      Consensus CDS
      CCDS24672.1
      UniProtKB/Swiss-Prot
      Q8K201
      UniProtKB/TrEMBL
      Q3U339
      Related
      ENSMUSP00000048441.4, ENSMUST00000036952.4
      Conserved Domains (1) summary
      pfam07462
      Location:50168
      MSP1_C; Merozoite surface protein 1 (MSP1) C-terminus

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000077.6 Reference GRCm38.p4 C57BL/6J

      Range
      52396428..52408723
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center