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    Ankrd35 ankyrin repeat domain 35 [ Mus musculus (house mouse) ]

    Gene ID: 213121, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ankrd35provided by MGI
    Official Full Name
    ankyrin repeat domain 35provided by MGI
    Primary source
    MGI:MGI:2442590
    See related
    Ensembl:ENSMUSG00000038354
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4732436F15Rik
    Expression
    Broad expression in bladder adult (RPKM 2.9), cerebellum adult (RPKM 1.9) and 21 other tissues See more
    Orthologs
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    Genomic context

    See Ankrd35 in Genome Data Viewer
    Location:
    3; 3 F2.1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (96577447..96598350)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (96670131..96691034)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (96474054..96494957)

    Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene integrin, alpha 10 Neighboring gene ribosomal protein L21, pseudogene 11 Neighboring gene protein inhibitor of activated STAT 3 Neighboring gene nudix (nucleoside diphosphate linked moiety X)-type motif 17 Neighboring gene polymerase (RNA) III (DNA directed) polypeptide C Neighboring gene predicted gene, 22581

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    ankyrin repeat domain-containing protein 35

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081139.1NP_001074608.1  ankyrin repeat domain-containing protein 35 isoform 1

      See identical proteins and their annotated locations for NP_001074608.1

      Status: VALIDATED

      Source sequence(s)
      AC112261
      Consensus CDS
      CCDS38558.1
      UniProtKB/TrEMBL
      E9Q9D8
      Related
      ENSMUSP00000047244.6, ENSMUST00000048427.9
      Conserved Domains (4) summary
      cd00204
      Location:81206
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:5384
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:190251
      Ank_2; Ankyrin repeats (3 copies)
      cl25732
      Location:710996
      SMC_N; RecF/RecN/SMC N terminal domain
    2. NM_001356538.1NP_001343467.1  ankyrin repeat domain-containing protein 35 isoform 1

      Status: VALIDATED

      Source sequence(s)
      AC112261
      Consensus CDS
      CCDS38558.1
      Conserved Domains (4) summary
      cd00204
      Location:81206
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00045
      Location:5384
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:190251
      Ank_2; Ankyrin repeats (3 copies)
      cl25732
      Location:710996
      SMC_N; RecF/RecN/SMC N terminal domain
    3. NM_001356539.1NP_001343468.1  ankyrin repeat domain-containing protein 35 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC112261
      Conserved Domains (3) summary
      PHA02875
      Location:7164
      PHA02875; ankyrin repeat protein; Provisional
      TIGR02168
      Location:659945
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      sd00045
      Location:3566
      ANK; ANK repeat [structural motif]
    4. NM_001356540.1NP_001343469.1  ankyrin repeat domain-containing protein 35 isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC112261, AK046624
      Conserved Domains (3) summary
      PHA02875
      Location:7164
      PHA02875; ankyrin repeat protein; Provisional
      TIGR02168
      Location:659945
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      sd00045
      Location:3566
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000069.7 Reference GRCm39 C57BL/6J

      Range
      96577447..96598350
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017319516.2XP_017175005.1  ankyrin repeat domain-containing protein 35 isoform X1

      Conserved Domains (3) summary
      PHA02875
      Location:7164
      PHA02875; ankyrin repeat protein; Provisional
      TIGR02168
      Location:659945
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      sd00045
      Location:3566
      ANK; ANK repeat [structural motif]
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