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    Slc45a3 solute carrier family 45, member 3 [ Mus musculus (house mouse) ]

    Gene ID: 212980, updated on 23-Jun-2021

    Summary

    Official Symbol
    Slc45a3provided by MGI
    Official Full Name
    solute carrier family 45, member 3provided by MGI
    Primary source
    MGI:MGI:1922082
    See related
    Ensembl:ENSMUSG00000026435
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pc; IPC; PRST; IPCA-6; Pcanap6; AU023994; AU043764; 2210413P12Rik
    Expression
    Biased expression in ovary adult (RPKM 64.4), stomach adult (RPKM 39.0) and 11 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Slc45a3 in Genome Data Viewer
    Location:
    1; 1 E4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (131890653..131910710)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (131962915..131982972)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (133859544..133879541)

    Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene RAB29, member RAS oncogene family Neighboring gene nuclear casein kinase and cyclin-dependent kinase substrate 1 Neighboring gene ELK4, member of ETS oncogene family Neighboring gene major facilitator superfamily domain containing 4A Neighboring gene RIKEN cDNA 4833413N01 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from PubChem

    General gene information

    Markers

    Homology

    Clone Names

    • MGC32471

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables sucrose:proton symporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables sucrose:proton symporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    solute carrier family 45 member 3
    Names
    Prostein
    prostate cancer-associated protein 6

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001177628.2NP_001171099.1  solute carrier family 45 member 3

      See identical proteins and their annotated locations for NP_001171099.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
      Source sequence(s)
      AC107837, AK035428, BY713333
      Consensus CDS
      CCDS15278.1
      UniProtKB/Swiss-Prot
      Q8K0H7
      Related
      ENSMUSP00000136190.2, ENSMUST00000177943.8
      Conserved Domains (1) summary
      cd17313
      Location:18537
      MFS_SLC45_SUC; Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters
    2. NM_145977.2NP_666089.1  solute carrier family 45 member 3

      See identical proteins and their annotated locations for NP_666089.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
      Source sequence(s)
      AC107837
      Consensus CDS
      CCDS15278.1
      UniProtKB/Swiss-Prot
      Q8K0H7
      Related
      ENSMUSP00000027695.7, ENSMUST00000027695.8
      Conserved Domains (1) summary
      cd17313
      Location:18537
      MFS_SLC45_SUC; Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000067.7 Reference GRCm39 C57BL/6J

      Range
      131890653..131910710
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006529341.3XP_006529404.1  solute carrier family 45 member 3 isoform X1

      See identical proteins and their annotated locations for XP_006529404.1

      UniProtKB/Swiss-Prot
      Q8K0H7
      Conserved Domains (1) summary
      cd17313
      Location:18537
      MFS_SLC45_SUC; Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters
    2. XM_006529342.3XP_006529405.1  solute carrier family 45 member 3 isoform X1

      See identical proteins and their annotated locations for XP_006529405.1

      UniProtKB/Swiss-Prot
      Q8K0H7
      Conserved Domains (1) summary
      cd17313
      Location:18537
      MFS_SLC45_SUC; Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters
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