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    Sh3bgrl2 SH3 domain binding glutamic acid-rich protein like 2 [ Mus musculus (house mouse) ]

    Gene ID: 212531, updated on 11-Aug-2018

    Summary

    Official Symbol
    Sh3bgrl2provided by MGI
    Official Full Name
    SH3 domain binding glutamic acid-rich protein like 2provided by MGI
    Primary source
    MGI:MGI:1915350
    See related
    Ensembl:ENSMUSG00000032261 Vega:OTTMUSG00000044944
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AA408038; B930089I21; A930014C21Rik
    Expression
    Broad expression in colon adult (RPKM 3.6), bladder adult (RPKM 2.8) and 25 other tissues See more
    Orthologs

    Genomic context

    See Sh3bgrl2 in Genome Data Viewer
    Location:
    9; 9 E2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 9 NC_000075.6 (83548338..83600292)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (83441945..83493899)

    Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene Leber congenital amaurosis 5 (human) Neighboring gene predicted gene 2087 Neighboring gene ribosomal protein S15A, pseudogene Neighboring gene predicted gene, 39384 Neighboring gene predicted gene, 36120 Neighboring gene predicted gene 2109

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    SH3 domain binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    nuclear membrane ISO
    Inferred from Sequence Orthology
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    SH3 domain-binding glutamic acid-rich-like protein 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172507.5NP_766095.1  SH3 domain-binding glutamic acid-rich-like protein 2

      See identical proteins and their annotated locations for NP_766095.1

      Status: PROVISIONAL

      Source sequence(s)
      AC113158, AC125106
      Consensus CDS
      CCDS40708.1
      UniProtKB/Swiss-Prot
      Q8BG73
      Related
      ENSMUSP00000108841.3, OTTMUSP00000065957, ENSMUST00000113215.9, OTTMUST00000118118
      Conserved Domains (1) summary
      cd03030
      Location:297
      GRX_SH3BGR; Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000075.6 Reference GRCm38.p4 C57BL/6J

      Range
      83548338..83600292
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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