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    Zswim4 zinc finger SWIM-type containing 4 [ Mus musculus (house mouse) ]

    Gene ID: 212168, updated on 23-Jun-2021

    Summary

    Official Symbol
    Zswim4provided by MGI
    Official Full Name
    zinc finger SWIM-type containing 4provided by MGI
    Primary source
    MGI:MGI:2443726
    See related
    Ensembl:ENSMUSG00000035671
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D330002I24; E130119J17Rik
    Expression
    Ubiquitous expression in adrenal adult (RPKM 36.0), whole brain E14.5 (RPKM 21.2) and 26 other tissues See more
    Orthologs
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    Genomic context

    See Zswim4 in Genome Data Viewer
    Location:
    8; 8 C2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (84937571..84963671, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (84210942..84237042, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (86734841..86760941, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene microRNA 3074-2 Neighboring gene microRNA 24-2 Neighboring gene microRNA 27a Neighboring gene DNA segment, Chr 8, ERATO Doi 738, expressed Neighboring gene methylthioribose-1-phosphate isomerase 1 Neighboring gene coiled-coil domain containing 130

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of Cul2-RING ubiquitin ligase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    zinc finger SWIM domain-containing protein 4
    Names
    zinc finger, SWIM domain containing 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_172503.3NP_766091.2  zinc finger SWIM domain-containing protein 4

      See identical proteins and their annotated locations for NP_766091.2

      Status: PROVISIONAL

      Source sequence(s)
      AC122794, AC159266
      Consensus CDS
      CCDS22471.1
      UniProtKB/Swiss-Prot
      Q8C7B8
      Related
      ENSMUSP00000040078.6, ENSMUST00000039480.7

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      84937571..84963671 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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