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    Mtmr9 myotubularin related protein 9 [ Mus musculus (house mouse) ]

    Gene ID: 210376, updated on 5-Aug-2018

    Summary

    Official Symbol
    Mtmr9provided by MGI
    Official Full Name
    myotubularin related protein 9provided by MGI
    Primary source
    MGI:MGI:2442842
    See related
    Ensembl:ENSMUSG00000035078
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MTMR8; mMTMH3; AA516943; AF073881; LIP-STYX; 9430075G12Rik
    Expression
    Ubiquitous expression in CNS E18 (RPKM 15.6), whole brain E14.5 (RPKM 14.8) and 28 other tissues See more
    Orthologs

    Genomic context

    See Mtmr9 in Genome Data Viewer
    Location:
    14; 14 D1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 14 NC_000080.6 (63521743..63544050, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (64142447..64162790, complement)

    Chromosome 14 - NC_000080.6Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 167, member A Neighboring gene predicted gene 17232 Neighboring gene L-threonine dehydrogenase Neighboring gene predicted gene 15918 Neighboring gene X-linked Kx blood group related 6 Neighboring gene predicted gene, 38524

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC54783

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enzyme regulator activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein phosphatase binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    negative regulation of autophagy ISO
    Inferred from Sequence Orthology
    more info
     
    positive regulation of phosphatase activity ISO
    Inferred from Sequence Orthology
    more info
     
    protein stabilization ISO
    Inferred from Sequence Orthology
    more info
     
    regulation of phosphatidylinositol dephosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    myotubularin-related protein 9

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177594.1NP_808262.1  myotubularin-related protein 9

      See identical proteins and their annotated locations for NP_808262.1

      Status: PROVISIONAL

      Source sequence(s)
      BC046275
      Consensus CDS
      CCDS27203.1
      UniProtKB/Swiss-Prot
      Q9Z2D0
      Related
      ENSMUSP00000059894.5, ENSMUST00000058679.6
      Conserved Domains (2) summary
      cd13211
      Location:197
      PH-GRAM_MTMR9; Myotubularian (MTM) related 9 protein (MTMR9) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:108444
      Myotub-related; Myotubularin-like phosphatase domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000080.6 Reference GRCm38.p4 C57BL/6J

      Range
      63521743..63544050 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011245001.2XP_011243303.1  myotubularin-related protein 9 isoform X1

      Conserved Domains (2) summary
      cd13211
      Location:197
      PH-GRAM_MTMR9; Myotubularian (MTM) related 9 protein (MTMR9) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:108444
      Myotub-related; Myotubularin-like phosphatase domain
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