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    Mtmr9 myotubularin related protein 9 [ Mus musculus (house mouse) ]

    Gene ID: 210376, updated on 23-Jun-2021

    Summary

    Official Symbol
    Mtmr9provided by MGI
    Official Full Name
    myotubularin related protein 9provided by MGI
    Primary source
    MGI:MGI:2442842
    See related
    Ensembl:ENSMUSG00000035078
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    LIP-; MTMR; MTMR8; mMTMH3; AA516943; AF073881; LIP-STYX; 9430075G12Rik
    Expression
    Ubiquitous expression in CNS E18 (RPKM 15.6), whole brain E14.5 (RPKM 14.8) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Mtmr9 in Genome Data Viewer
    Location:
    14; 14 D1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (63757100..63781402, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (63519651..63544027, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (64142447..64162790, complement)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 167, member A Neighboring gene predicted gene 17232 Neighboring gene L-threonine dehydrogenase Neighboring gene VISTA enhancer mm1542 Neighboring gene predicted gene 15918 Neighboring gene X-linked Kx blood group related 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC54783

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables enzyme regulator activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables phosphatidylinositol-3-phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein phosphatase binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within endocytosis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of autophagy IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in negative regulation of autophagy ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in phosphatidylinositol dephosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    involved_in positive regulation of phosphatase activity ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein stabilization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in regulation of phosphatidylinositol dephosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    part_of protein-containing complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    myotubularin-related protein 9
    Names
    inactive phosphatidylinositol 3-phosphatase 9

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_177594.1NP_808262.1  myotubularin-related protein 9

      See identical proteins and their annotated locations for NP_808262.1

      Status: PROVISIONAL

      Source sequence(s)
      BC046275
      Consensus CDS
      CCDS27203.1
      UniProtKB/Swiss-Prot
      Q9Z2D0
      Related
      ENSMUSP00000059894.6, ENSMUST00000058679.7
      Conserved Domains (2) summary
      cd13211
      Location:197
      PH-GRAM_MTMR9; Myotubularian (MTM) related 9 protein (MTMR9) Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:108444
      Myotub-related; Myotubularin-like phosphatase domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      63757100..63781402 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030247706.2XP_030103566.1  myotubularin-related protein 9 isoform X1

      Conserved Domains (1) summary
      pfam06602
      Location:23360
      Myotub-related; Myotubularin-like phosphatase domain
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