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    Dip2c disco interacting protein 2 homolog C [ Mus musculus (house mouse) ]

    Gene ID: 208440, updated on 25-Sep-2017

    Summary

    Official Symbol
    Dip2cprovided by MGI
    Official Full Name
    disco interacting protein 2 homolog Cprovided by MGI
    Primary source
    MGI:MGI:1920179
    See related
    Ensembl:ENSMUSG00000048264 Vega:OTTMUSG00000037982
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    mKIAA0934; 9630044M06; 2900024P20Rik
    Expression
    Ubiquitous expression in CNS E18 (RPKM 8.8), whole brain E14.5 (RPKM 7.1) and 25 other tissues See more
    Orthologs

    Genomic context

    See Dip2c in Genome Data Viewer
    Location:
    13; 13 A1
    Exon count:
    38
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (9276503..9668928)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (9275772..9668171)

    Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene predicted gene 8784 Neighboring gene cytochrome c oxidase subunit 8A, mitochondrial pseudogene Neighboring gene eukaryotic translation initiation factor 4E nuclear import factor 1 pseudogene Neighboring gene predicted gene, 36423 Neighboring gene zinc finger, MYND domain containing 11 Neighboring gene predicted gene, 40665

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Clone Names

    • KIAA0934

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    disco-interacting protein 2 homolog C
    Names
    DIP2 disco-interacting protein 2 homolog C

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001081426.2NP_001074895.2  disco-interacting protein 2 homolog C

      See identical proteins and their annotated locations for NP_001074895.2

      Status: VALIDATED

      Source sequence(s)
      AC124579, AC131743, AC133934
      Consensus CDS
      CCDS36589.2
      UniProtKB/TrEMBL
      B2RQ71
      Related
      ENSMUSP00000133806.1, OTTMUSP00000054897, ENSMUST00000174552.7, OTTMUST00000097883
      Conserved Domains (3) summary
      cd05905
      Location:341905
      Dip2; Disco-interacting protein 2 (Dip2)
      pfam06464
      Location:7120
      DMAP_binding; DMAP1-binding Domain
      cl17068
      Location:9931545
      AFD_class_I; Adenylate forming domain, Class I superfamily

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

      Range
      9276503..9668928
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006516473.1XP_006516536.1  disco-interacting protein 2 homolog C isoform X1

      Conserved Domains (5) summary
      cd05905
      Location:397961
      Dip2; Disco-interacting protein 2 (Dip2)
      COG0318
      Location:373964
      CaiC; Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]
      pfam00501
      Location:10361510
      AMP-binding; AMP-binding enzyme
      pfam06464
      Location:7176
      DMAP_binding; DMAP1-binding Domain
      cl17068
      Location:10531605
      AFD_class_I; Adenylate forming domain, Class I superfamily
    2. XM_006516474.2XP_006516537.1  disco-interacting protein 2 homolog C isoform X2

      Related
      ENSMUSP00000131238.2, OTTMUSP00000054898, ENSMUST00000169960.9, OTTMUST00000097884
      Conserved Domains (5) summary
      cd05905
      Location:397961
      Dip2; Disco-interacting protein 2 (Dip2)
      COG0318
      Location:373964
      CaiC; Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]
      pfam00501
      Location:10321506
      AMP-binding; AMP-binding enzyme
      pfam06464
      Location:7176
      DMAP_binding; DMAP1-binding Domain
      cl17068
      Location:10491601
      AFD_class_I; Adenylate forming domain, Class I superfamily
    3. XM_006516475.3XP_006516538.1  disco-interacting protein 2 homolog C isoform X3

      Conserved Domains (5) summary
      cd05905
      Location:341905
      Dip2; Disco-interacting protein 2 (Dip2)
      COG0318
      Location:317908
      CaiC; Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism]
      pfam00501
      Location:9801454
      AMP-binding; AMP-binding enzyme
      pfam06464
      Location:7120
      DMAP_binding; DMAP1-binding Domain
      cl17068
      Location:9971549
      AFD_class_I; Adenylate forming domain, Class I superfamily

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_172459.1: Suppressed sequence

      Description
      NM_172459.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
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