Format

Send to:

Choose Destination
    • Showing Current items.

    Rps5 ribosomal protein S5 [ Mus musculus (house mouse) ]

    Gene ID: 20103, updated on 12-Aug-2018

    Summary

    Official Symbol
    Rps5provided by MGI
    Official Full Name
    ribosomal protein S5provided by MGI
    Primary source
    MGI:MGI:1097682
    See related
    Ensembl:ENSMUSG00000012848 Vega:OTTMUSG00000023212
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AA617411
    Expression
    Ubiquitous expression in ovary adult (RPKM 1722.8), large intestine adult (RPKM 951.0) and 28 other tissues See more
    Orthologs

    Genomic context

    See Rps5 in Genome Data Viewer
    Location:
    7; 7 A1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (12922311..12926686)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (13507660..13512035)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene zinc finger protein 128 Neighboring gene zinc finger and SCAN domain containing 22 Neighboring gene ring finger protein 225 Neighboring gene RIKEN cDNA 1810019N24 gene Neighboring gene predicted gene 29638

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    mRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mRNA binding ISO
    Inferred from Sequence Orthology
    more info
     
    rRNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    regulation of translational fidelity ISO
    Inferred from Sequence Orthology
    more info
     
    ribosomal small subunit assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    translation ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytosolic small ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    ribonucleoprotein complex ISO
    Inferred from Sequence Orthology
    more info
    PubMed 
    ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    40S ribosomal protein S5
    Names
    S5 ribosomal protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009095.2NP_033121.2  40S ribosomal protein S5

      See identical proteins and their annotated locations for NP_033121.2

      Status: VALIDATED

      Source sequence(s)
      BC058690, BY024242
      Consensus CDS
      CCDS20817.1
      UniProtKB/Swiss-Prot
      P97461
      UniProtKB/TrEMBL
      Q91V55
      Related
      ENSMUSP00000004554.7, OTTMUSP00000026965, ENSMUST00000004554.13, OTTMUST00000056174
      Conserved Domains (1) summary
      cd14867
      Location:18204
      uS7_Eukaryote; Eukaryota homolog of Ribosomal Protein S7

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      12922311..12926686
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center