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    Rpl36a ribosomal protein L36A [ Mus musculus (house mouse) ]

    Gene ID: 19982, updated on 22-Aug-2021

    Summary

    Official Symbol
    Rpl36aprovided by MGI
    Official Full Name
    ribosomal protein L36Aprovided by MGI
    Primary source
    MGI:MGI:1201789
    See related
    Ensembl:ENSMUSG00000079435
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    L4; Rp; L44L; Rpl44
    Expression
    Broad expression in liver E14 (RPKM 448.8), liver E14.5 (RPKM 302.2) and 19 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Rpl36a in Genome Data Viewer
    Location:
    X; X E3
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (133486403..133488811)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (134585654..134588062)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (131120193..131122601)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene translocase of inner mitochondrial membrane 8A1 Neighboring gene Bruton agammaglobulinemia tyrosine kinase Neighboring gene galactosidase, alpha Neighboring gene heterogeneous nuclear ribonucleoprotein H2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables structural constituent of ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in cytoplasmic translation ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of cytosolic large ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosolic ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in polysomal ribosome ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    60S ribosomal protein L36a
    Names
    60S ribosomal protein L44
    ribosomal protein L44

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_019865.5NP_063918.1  60S ribosomal protein L36a

      See identical proteins and their annotated locations for NP_063918.1

      Status: VALIDATED

      Source sequence(s)
      AK012502, AV453514, BU529569
      Consensus CDS
      CCDS41123.1
      UniProtKB/Swiss-Prot
      P83882
      UniProtKB/TrEMBL
      Q5M9P1
      Related
      ENSMUSP00000108837.2, ENSMUST00000113211.8
      Conserved Domains (1) summary
      PTZ00157
      Location:186
      PTZ00157; 60S ribosomal protein L36a; Provisional

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      133486403..133488811
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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