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    Rpl28 ribosomal protein L28 [ Mus musculus (house mouse) ]

    Gene ID: 19943, updated on 23-Jun-2021

    Summary

    Official Symbol
    Rpl28provided by MGI
    Official Full Name
    ribosomal protein L28provided by MGI
    Primary source
    MGI:MGI:101839
    See related
    Ensembl:ENSMUSG00000030432
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    D7Wsu21; D7Wsu21e
    Expression
    Ubiquitous expression in bladder adult (RPKM 268.3), liver E14.5 (RPKM 253.4) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Rpl28 in Genome Data Viewer
    Location:
    7 A1; 7 2.77 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (4795964..4797546)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (4792965..4794547)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (4744567..4746149)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene interleukin 11 Neighboring gene transmembrane protein 190 Neighboring gene transmembrane protein 238 Neighboring gene uncharacterized LOC118567469 Neighboring gene ubiquitin-conjugating enzyme E2S Neighboring gene shisa family member 7 Neighboring gene predicted gene, 36127

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC107666, MGC115078

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables structural constituent of ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cell body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoplasmic ribonucleoprotein granule ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol TAS
    Traceable Author Statement
    more info
     
    part_of cytosolic large ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    part_of cytosolic large ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosolic ribosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in dendrite ISO
    Inferred from Sequence Orthology
    more info
     
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    60S ribosomal protein L28
    NP_033107.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009081.2NP_033107.1  60S ribosomal protein L28

      See identical proteins and their annotated locations for NP_033107.1

      Status: PROVISIONAL

      Source sequence(s)
      AK012368
      Consensus CDS
      CCDS39742.1
      UniProtKB/Swiss-Prot
      P41105
      UniProtKB/TrEMBL
      Q5M9J8
      Related
      ENSMUSP00000032597.6, ENSMUST00000032597.12
      Conserved Domains (1) summary
      pfam01778
      Location:5119
      Ribosomal_L28e; Ribosomal L28e protein family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      4795964..4797546
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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