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    Klf11 Kruppel-like factor 11 [ Mus musculus (house mouse) ]

    Gene ID: 194655, updated on 28-Jun-2021

    Summary

    Official Symbol
    Klf11provided by MGI
    Official Full Name
    Kruppel-like factor 11provided by MGI
    Primary source
    MGI:MGI:2653368
    See related
    Ensembl:ENSMUSG00000020653
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tieg; Tieg2; Tieg3; Tieg2b; 9830142A17; D12Ertd427; D12Ertd427e
    Expression
    Ubiquitous expression in lung adult (RPKM 9.8), ovary adult (RPKM 9.6) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Klf11 in Genome Data Viewer
    Location:
    12 A1.3; 12 8.49 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (24701370..24712781)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (24651371..24662782)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 12 NC_000078.5 (25336236..25347647)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene grainyhead like transcription factor 1 Neighboring gene cytochrome c oxidase subunit VIIa polypeptide 2-like pseudogene Neighboring gene cystin 1 Neighboring gene predicted gene, 36129 Neighboring gene predicted gene, 52012

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Component Evidence Code Pubs
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in focal adhesion ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nuclear body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus IC
    Inferred by Curator
    more info
    PubMed 

    General protein information

    Preferred Names
    Krueppel-like factor 11
    Names
    TGFB inducible early growth response 2
    TGFB inducible early growth response 3
    TGFB-inducible early growth response protein 2b
    TGFB-inducible early growth response protein 3
    TIEG-3
    transforming growth factor-beta-inducible early growth response protein 3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178357.3NP_848134.1  Krueppel-like factor 11

      See identical proteins and their annotated locations for NP_848134.1

      Status: VALIDATED

      Source sequence(s)
      AK038397, DV654709
      Consensus CDS
      CCDS25842.1
      UniProtKB/Swiss-Prot
      Q8K1S5
      Related
      ENSMUSP00000020982.6, ENSMUST00000020982.7
      Conserved Domains (4) summary
      COG5048
      Location:382439
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:389408
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:444466
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:430453
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      24701370..24712781
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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