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    Abhd16a abhydrolase domain containing 16A [ Mus musculus (house mouse) ]

    Gene ID: 193742, updated on 23-Jun-2021

    Summary

    Official Symbol
    Abhd16aprovided by MGI
    Official Full Name
    abhydrolase domain containing 16Aprovided by MGI
    Primary source
    MGI:MGI:99476
    See related
    Ensembl:ENSMUSG00000007036
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Bat; NG2; Bat5; NG26; Bat-5; mBAT5; AI326074; D17H6S82; D17H6S82E
    Expression
    Ubiquitous expression in cerebellum adult (RPKM 54.1), adrenal adult (RPKM 49.8) and 28 other tissues See more
    Orthologs
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    Genomic context

    See Abhd16a in Genome Data Viewer
    Location:
    17 B1; 17 18.59 cM
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (35308210..35321963)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (35089234..35102987)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (35226236..35239932)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene lymphocyte antigen 6 complex, locus G6D Neighboring gene lymphocyte antigen 6 complex, locus G6E Neighboring gene lymphocyte antigen 6 complex, locus G6F Neighboring gene lymphocyte antigen 6 complex, locus G5C Neighboring gene lymphocyte antigen 6 complex, locus G5B Neighboring gene casein kinase 2, beta polypeptide

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC19234

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables acylglycerol lipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables acylglycerol lipase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables acylglycerol lipase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables palmitoyl-(protein) hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables phospholipase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    enables phospholipase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    phosphatidylserine lipase ABHD16A
    Names
    HLA-B associated transcript 5
    abhydrolase domain-containing protein 16A
    alpha/beta hydrolase domain-containing protein 16A
    monoacylglycerol lipase ABHD16A
    protein ABHD16A
    protein BAT5
    NP_848707.1
    XP_030105460.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_178592.3NP_848707.1  phosphatidylserine lipase ABHD16A

      See identical proteins and their annotated locations for NP_848707.1

      Status: PROVISIONAL

      Source sequence(s)
      AC087117
      Consensus CDS
      CCDS28681.1
      UniProtKB/Swiss-Prot
      Q9Z1Q2
      Related
      ENSMUSP00000007251.8, ENSMUST00000007251.14
      Conserved Domains (1) summary
      pfam00561
      Location:280408
      Abhydrolase_1; alpha/beta hydrolase fold

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      35308210..35321963
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030249600.1XP_030105460.1  phosphatidylserine lipase ABHD16A isoform X1

      Conserved Domains (1) summary
      pfam00561
      Location:174302
      Abhydrolase_1; alpha/beta hydrolase fold

    RNA

    1. XR_385303.5 RNA Sequence

    2. XR_004939480.1 RNA Sequence

    3. XR_001782059.3 RNA Sequence

      Related
      ENSMUST00000173846.8
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