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    Kif20a kinesin family member 20A [ Mus musculus (house mouse) ]

    Gene ID: 19348, updated on 5-Feb-2019

    Summary

    Official Symbol
    Kif20aprovided by MGI
    Official Full Name
    kinesin family member 20Aprovided by MGI
    Primary source
    MGI:MGI:1201682
    See related
    Ensembl:ENSMUSG00000003779
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AA415432; Rab6kifl
    Expression
    Broad expression in CNS E11.5 (RPKM 32.7), liver E14 (RPKM 27.3) and 18 other tissues See more
    Orthologs

    Genomic context

    See Kif20a in Genome Data Viewer
    Location:
    18 B1; 18 18.69 cM
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 18 NC_000084.6 (34624624..34633277)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 18 NC_000084.5 (34784278..34792931)

    Chromosome 18 - NC_000084.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4933408B17 gene Neighboring gene bromodomain containing 8 Neighboring gene predicted gene, 41688 Neighboring gene CDC23 cell division cycle 23 Neighboring gene glial cell line derived neurotrophic factor family receptor alpha 3 Neighboring gene cell division cycle 25C Neighboring gene ribosomal protein L29 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Gene trapped (1) 
    • Targeted (3) 

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    ATPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    microtubule binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    microtubule motor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein kinase binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    microtubule bundle formation ISO
    Inferred from Sequence Orthology
    more info
     
    microtubule-based movement IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    midbody abscission ISO
    Inferred from Sequence Orthology
    more info
     
    mitotic cytokinesis ISO
    Inferred from Sequence Orthology
    more info
     
    protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of cytokinesis ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    cleavage furrow ISO
    Inferred from Sequence Orthology
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    intercellular bridge ISO
    Inferred from Sequence Orthology
    more info
     
    kinesin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    microtubule IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    midbody ISO
    Inferred from Sequence Orthology
    more info
     
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    spindle ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    kinesin-like protein KIF20A
    Names
    Rabkinesin-6
    kinesin-like protein 174
    rab6-interacting kinesin-like protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001166406.1NP_001159878.1  kinesin-like protein KIF20A

      See identical proteins and their annotated locations for NP_001159878.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) and variants 2 and 3 encode the same protein.
      Source sequence(s)
      AK084732, BC060608
      Consensus CDS
      CCDS29131.1
      UniProtKB/Swiss-Prot
      P97329
      Related
      ENSMUSP00000132659.1, ENSMUST00000166044.1
      Conserved Domains (4) summary
      cd01368
      Location:62504
      KISc_KIF23_like; Kinesin motor domain, KIF23-like subgroup
      pfam00225
      Location:69505
      Kinesin; Kinesin motor domain
      cd16269
      Location:620631
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:536651
      GBP_C; Guanylate-binding protein, C-terminal domain
    2. NM_001166407.1NP_001159879.1  kinesin-like protein KIF20A

      See identical proteins and their annotated locations for NP_001159879.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) has an alternate 5' UTR exon, as compared to variant 1. Variants 1-3 encode the same protein.
      Source sequence(s)
      AC074335, AK084732, AK144844
      Consensus CDS
      CCDS29131.1
      UniProtKB/Swiss-Prot
      P97329
      Related
      ENSMUSP00000130045.1, ENSMUST00000167161.7
      Conserved Domains (4) summary
      cd01368
      Location:62504
      KISc_KIF23_like; Kinesin motor domain, KIF23-like subgroup
      pfam00225
      Location:69505
      Kinesin; Kinesin motor domain
      cd16269
      Location:620631
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:536651
      GBP_C; Guanylate-binding protein, C-terminal domain
    3. NM_009004.4NP_033030.1  kinesin-like protein KIF20A

      See identical proteins and their annotated locations for NP_033030.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) has an alternate 5' UTR exon, as compared to variant 1. Variants 1-3 encode the same protein.
      Source sequence(s)
      AK084732, AK144844, BY012551
      Consensus CDS
      CCDS29131.1
      UniProtKB/Swiss-Prot
      P97329
      Conserved Domains (4) summary
      cd01368
      Location:62504
      KISc_KIF23_like; Kinesin motor domain, KIF23-like subgroup
      pfam00225
      Location:69505
      Kinesin; Kinesin motor domain
      cd16269
      Location:620631
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:536651
      GBP_C; Guanylate-binding protein, C-terminal domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000084.6 Reference GRCm38.p4 C57BL/6J

      Range
      34624624..34633277
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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