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    Rassf3 Ras association (RalGDS/AF-6) domain family member 3 [ Mus musculus (house mouse) ]

    Gene ID: 192678, updated on 23-Jun-2021

    Summary

    Official Symbol
    Rassf3provided by MGI
    Official Full Name
    Ras association (RalGDS/AF-6) domain family member 3provided by MGI
    Primary source
    MGI:MGI:2179722
    See related
    Ensembl:ENSMUSG00000025795
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AW212023; AW322379
    Expression
    Ubiquitous expression in bladder adult (RPKM 43.3), lung adult (RPKM 33.9) and 24 other tissues See more
    Orthologs
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    Genomic context

    See Rassf3 in Genome Data Viewer
    Location:
    10; 10 D2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (121246255..121312155, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (121410350..121476250, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (120847406..120913306, complement)

    Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene glucosamine (N-acetyl)-6-sulfatase Neighboring gene mitochondrial ribosomal protein S11 pseudogene Neighboring gene predicted gene, 53638 Neighboring gene predicted gene, 40787 Neighboring gene predicted gene, 46204

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    ras association domain-containing protein 3
    Names
    Ras association (RalGDS/AF-6) domain family 3
    Ras association domain family 3
    novel ras effector 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_138956.3NP_620406.1  ras association domain-containing protein 3

      See identical proteins and their annotated locations for NP_620406.1

      Status: PROVISIONAL

      Source sequence(s)
      AC140264
      Consensus CDS
      CCDS24211.1
      UniProtKB/Swiss-Prot
      Q99P51
      Related
      ENSMUSP00000026902.8, ENSMUST00000026902.9
      Conserved Domains (2) summary
      cd01778
      Location:78182
      RASSF1_RA; Ubiquitin-like domain of RASSF1 tumour supproessor protein
      pfam16517
      Location:186225
      Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000076.7 Reference GRCm39 C57BL/6J

      Range
      121246255..121312155 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006513379.2XP_006513442.1  ras association domain-containing protein 3 isoform X2

      Conserved Domains (2) summary
      pfam16517
      Location:117156
      Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
      cl28922
      Location:1110
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
    2. XM_011243388.1XP_011241690.1  ras association domain-containing protein 3 isoform X1

      Conserved Domains (2) summary
      pfam16517
      Location:173212
      Nore1-SARAH; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain
      cl28922
      Location:37166
      Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold
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