Format

Send to:

Choose Destination
    • Showing Current items.

    Morc1 microrchidia 1 [ Mus musculus (house mouse) ]

    Gene ID: 17450, updated on 31-Jan-2019

    Summary

    Official Symbol
    Morc1provided by MGI
    Official Full Name
    microrchidia 1provided by MGI
    Primary source
    MGI:MGI:1316740
    See related
    Ensembl:ENSMUSG00000022652
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Morc
    Expression
    Low expression observed in reference dataset See more
    Orthologs

    Genomic context

    See Morc1 in Genome Data Viewer
    Location:
    16 B5; 16 30.75 cM
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 16 NC_000082.6 (48431237..48630905)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (48431350..48631018)

    Chromosome 16 - NC_000082.6Genomic Context describing neighboring genes Neighboring gene developmental pluripotency associated 2 Neighboring gene predicted gene 5485 Neighboring gene predicted gene, 41458 Neighboring gene T cell receptor associated transmembrane adaptor 1 Neighboring gene TWIST neighbor pseudogene Neighboring gene resistin like beta

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    molecular_function ND
    No biological Data available
    more info
     
    zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    DNA hypermethylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    DNA methylation involved in gamete generation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    behavioral fear response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    cell differentiation IEA
    Inferred from Electronic Annotation
    more info
     
    multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of DNA-templated transcription, initiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of gene expression IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of transposition IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of gene expression, epigenetic IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    spermatogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    male germ cell nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    MORC family CW-type zinc finger protein 1
    Names
    morc1
    protein microrchidia

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010816.1NP_034946.1  MORC family CW-type zinc finger protein 1

      See identical proteins and their annotated locations for NP_034946.1

      Status: PROVISIONAL

      Source sequence(s)
      AF084945
      Consensus CDS
      CCDS37351.1
      UniProtKB/Swiss-Prot
      Q9WVL5
      Related
      ENSMUSP00000023330.6, ENSMUST00000023330.7
      Conserved Domains (2) summary
      pfam07496
      Location:481528
      zf-CW; CW-type Zinc Finger
      cl00075
      Location:27159
      HATPase_c; Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000082.6 Reference GRCm38.p4 C57BL/6J

      Range
      48431237..48630905
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center