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    Ccndbp1 cyclin D-type binding-protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 17151, updated on 23-Jun-2021

    Summary

    Official Symbol
    Ccndbp1provided by MGI
    Official Full Name
    cyclin D-type binding-protein 1provided by MGI
    Primary source
    MGI:MGI:109595
    See related
    Ensembl:ENSMUSG00000023572
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    DI; GC; Ma; DIP1; GCIP; Maid; SSEC; SECC-8; SSEC-8; AU022347
    Expression
    Ubiquitous expression in cerebellum adult (RPKM 18.2), bladder adult (RPKM 11.1) and 28 other tissues See more
    Orthologs
    NEW
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    Try the new Transcript table

    Genomic context

    See Ccndbp1 in Genome Data Viewer
    Location:
    2 E5; 2 60.37 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (120838888..120847393)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (121008395..121016912)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (120834144..120842648)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene expressed sequence AV039307 Neighboring gene ubiquitin protein ligase E3 component n-recognin 1 Neighboring gene transmembrane protein 62 Neighboring gene small nucleolar RNA, C/D box 3B, pseudogene 2 Neighboring gene erythrocyte membrane protein band 4.2 Neighboring gene WW domain binding protein 2 pseudogene Neighboring gene transglutaminase 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    acts_upstream_of_or_within cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in regulation of cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear body ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
    PubMed 

    General protein information

    Preferred Names
    cyclin-D1-binding protein 1
    Names
    grap2 and cyclin-D-interacting protein
    maternal Id-like protein
    maternal inhibition of differentiation
    stage specific embryonic cDNA-8 protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001355127.1NP_001342056.1  cyclin-D1-binding protein 1 isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) contains an alternate exon in the 3' end compared to variant 1, that causes a frameshift. The resulting isoform (2) has a longer and distinct C-terminus compared to isoform 1.
      Source sequence(s)
      AL844548
      Related
      ENSMUSP00000125961.3, ENSMUST00000171260.3
      Conserved Domains (1) summary
      pfam13324
      Location:52305
      GCIP; Grap2 and cyclin-D-interacting
    2. NM_010761.2NP_034891.2  cyclin-D1-binding protein 1

      See identical proteins and their annotated locations for NP_034891.2

      Status: VALIDATED

      Source sequence(s)
      AK163150, BB517577, CO810054
      Consensus CDS
      CCDS38213.1
      UniProtKB/Swiss-Prot
      Q3TVC7
      Related
      ENSMUSP00000062496.9, ENSMUST00000060455.15
      Conserved Domains (1) summary
      pfam13324
      Location:52316
      GCIP; Grap2 and cyclin-D-interacting

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      120838888..120847393
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006498852.4XP_006498915.1  cyclin-D1-binding protein 1 isoform X2

      Conserved Domains (1) summary
      pfam13324
      Location:1144
      GCIP; Grap2 and cyclin-D-interacting
    2. XM_011239329.3XP_011237631.1  cyclin-D1-binding protein 1 isoform X1

      Conserved Domains (1) summary
      pfam13324
      Location:1133
      GCIP; Grap2 and cyclin-D-interacting
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