Format

Send to:

Choose Destination
    • Showing Current items.

    Il17rd interleukin 17 receptor D [ Mus musculus (house mouse) ]

    Gene ID: 171463, updated on 23-Jun-2021

    Summary

    Official Symbol
    Il17rdprovided by MGI
    Official Full Name
    interleukin 17 receptor Dprovided by MGI
    Primary source
    MGI:MGI:2159727
    See related
    Ensembl:ENSMUSG00000040717
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Se; Sef; Sef-S; AI428510; 2810004A10Rik
    Expression
    Broad expression in limb E14.5 (RPKM 5.6), lung adult (RPKM 4.4) and 23 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Il17rd in Genome Data Viewer
    Location:
    14; 14 A3
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    109 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (26760921..26829243)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (27038964..27107286)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (27852187..27920472)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1 Neighboring gene predicted gene, 41114 Neighboring gene homeobox gene expressed in ES cells Neighboring gene Rho guanine nucleotide exchange factor (GEF) 3 Neighboring gene predicted gene 7591 Neighboring gene predicted gene, 34848

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC118454

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables interleukin-17 receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    interleukin-17 receptor D
    Names
    IL-17 receptor D
    IL-17RD
    interleukin-17 receptor-like protein
    mSef
    sef homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_134437.3NP_602319.1  interleukin-17 receptor D precursor

      See identical proteins and their annotated locations for NP_602319.1

      Status: VALIDATED

      Source sequence(s)
      AC125152, AF459444, BY152713, CD564540
      Consensus CDS
      CCDS26885.1
      UniProtKB/Swiss-Prot
      Q8JZL1
      Related
      ENSMUSP00000036076.4, ENSMUST00000035336.5
      Conserved Domains (2) summary
      pfam08357
      Location:356511
      SEFIR; SEFIR domain
      pfam16742
      Location:48169
      IL17R_D_N; N-terminus of interleukin 17 receptor D

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      26760921..26829243
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006518667.4XP_006518730.1  interleukin-17 receptor D isoform X1

      Conserved Domains (2) summary
      pfam08357
      Location:349504
      SEFIR; SEFIR domain
      pfam16742
      Location:48169
      IL17R_D_N; N-terminus of interleukin 17 receptor D
    2. XM_006518668.2XP_006518731.1  interleukin-17 receptor D isoform X2

      UniProtKB/Swiss-Prot
      Q8JZL1
      Related
      ENSMUSP00000153543.2, ENSMUST00000225146.2
      Conserved Domains (2) summary
      pfam08357
      Location:212367
      SEFIR; SEFIR domain
      pfam16742
      Location:125
      IL17R_D_N; N-terminus of interleukin 17 receptor D

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_027265.1: Suppressed sequence

      Description
      NM_027265.1: This RefSeq was permanently suppressed because it is primarily UTR sequence.
    Support Center