Format

Send to:

Choose Destination
    • Showing Current items.

    Acbd3 acyl-Coenzyme A binding domain containing 3 [ Mus musculus (house mouse) ]

    Gene ID: 170760, updated on 31-Jan-2019

    Summary

    Official Symbol
    Acbd3provided by MGI
    Official Full Name
    acyl-Coenzyme A binding domain containing 3provided by MGI
    Primary source
    MGI:MGI:2181074
    See related
    Ensembl:ENSMUSG00000026499
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pap7; 60kDa; GCP60; GOLPH1; Gocap1; D1Ertd10e; 8430407O11Rik
    Expression
    Ubiquitous expression in placenta adult (RPKM 17.7), limb E14.5 (RPKM 13.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Acbd3 in Genome Data Viewer
    Location:
    1 H4; 1 84.46 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 1 NC_000067.6 (180726043..180754204)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (182656174..182684335)

    Chromosome 1 - NC_000067.6Genomic Context describing neighboring genes Neighboring gene Mix1 homeobox-like 1 (Xenopus laevis) Neighboring gene predicted gene 8101 Neighboring gene predicted gene, 38293 Neighboring gene RIKEN cDNA 2900024J01 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    fatty-acyl-CoA binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein kinase A regulatory subunit binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    steroid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Golgi apparatus ISO
    Inferred from Sequence Orthology
    more info
     
    Golgi membrane ISO
    Inferred from Sequence Orthology
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    Golgi resident protein GCP60
    Names
    PBR associated protein
    PBR- and PKA-associated protein 7
    acyl-CoA-binding domain-containing protein 3
    golgi complex associated protein 1, 60 kDa
    golgi complex-associated protein 1
    golgi phosphoprotein 1
    peripheral benzodiazepine receptor-associated protein PAP7
    peripherial benzodiazepine receptor associated protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_133225.3NP_573488.2  Golgi resident protein GCP60

      See identical proteins and their annotated locations for NP_573488.2

      Status: VALIDATED

      Source sequence(s)
      AK030371, BC060602, BU756506
      Consensus CDS
      CCDS15572.1
      UniProtKB/Swiss-Prot
      Q8BMP6
      UniProtKB/TrEMBL
      A0A0R4J079, Q6P9T6
      Related
      ENSMUSP00000027780.4, ENSMUST00000027780.5
      Conserved Domains (2) summary
      pfam00887
      Location:81167
      ACBP; Acyl CoA binding protein
      pfam13897
      Location:394524
      GOLD_2; Golgi-dynamics membrane-trafficking

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000067.6 Reference GRCm38.p4 C57BL/6J

      Range
      180726043..180754204
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center