Format

Send to:

Choose Destination
    • Showing Current items.

    1700028P14Rik RIKEN cDNA 1700028P14 gene [ Mus musculus (house mouse) ]

    Gene ID: 67483, updated on 5-Jun-2018

    Summary

    Official Symbol
    1700028P14Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 1700028P14 geneprovided by MGI
    Primary source
    MGI:MGI:1914733
    See related
    Ensembl:ENSMUSG00000033053
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AV209940
    Expression
    Restricted expression toward testis adult (RPKM 67.4) See more
    Orthologs

    Genomic context

    See 1700028P14Rik in Genome Data Viewer
    Location:
    19; 19 B
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 19 NC_000085.6 (23558760..23652812, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (23633250..23727302, complement)

    Chromosome 19 - NC_000085.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 41821 Neighboring gene MAM domain containing 2 Neighboring gene predicted gene, 34012 Neighboring gene 40S ribosomal protein S7 pseudogene Neighboring gene SAP domain containing ribonucleoprotein pseudogene Neighboring gene protein prenyltransferase alpha subunit repeat containing 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein C9orf135 homolog
    Names
    uncharacterized protein C9orf135 homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026188.2NP_080464.1  protein C9orf135 homolog

      See identical proteins and their annotated locations for NP_080464.1

      Status: PROVISIONAL

      Source sequence(s)
      AK006473
      Consensus CDS
      CCDS29708.1
      UniProtKB/Swiss-Prot
      Q9CQC3
      Related
      ENSMUSP00000048680.3, ENSMUST00000035849.3
      Conserved Domains (1) summary
      pfam15139
      Location:28219
      DUF4572; Domain of unknown function (DUF4572)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000085.6 Reference GRCm38.p4 C57BL/6J

      Range
      23558760..23652812 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center