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    Mfsd14a major facilitator superfamily domain containing 14A [ Mus musculus (house mouse) ]

    Gene ID: 15247, updated on 19-Mar-2019

    Summary

    Official Symbol
    Mfsd14aprovided by MGI
    Official Full Name
    major facilitator superfamily domain containing 14Aprovided by MGI
    Primary source
    MGI:MGI:1201609
    See related
    Ensembl:ENSMUSG00000089911
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hiat1
    Expression
    Ubiquitous expression in testis adult (RPKM 21.5), placenta adult (RPKM 9.3) and 28 other tissues See more
    Orthologs

    Genomic context

    See Mfsd14a in Genome Data Viewer
    Location:
    3; 3 G1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 3 NC_000069.6 (116631164..116662692, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (116334082..116365595, complement)

    Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 39 Neighboring gene tRNA methyltransferase 13 Neighboring gene SAS-6 centriolar assembly protein Neighboring gene solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3 Neighboring gene predicted gene, 40126 Neighboring gene amylo-1,6-glucosidase, 4-alpha-glucanotransferase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Clone Names

    • MGC144858

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acrosome assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    sperm mitochondrion organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    spermatid development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    spermatid nucleus differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    spermatogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    hippocampus abundant transcript 1 protein
    Names
    hippocampus abundant gene transcript 1
    tetracycline transporter-like protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_008246.2NP_032272.2  hippocampus abundant transcript 1 protein

      See identical proteins and their annotated locations for NP_032272.2

      Status: VALIDATED

      Source sequence(s)
      AK158838, D88315
      Consensus CDS
      CCDS17790.1
      UniProtKB/Swiss-Prot
      P70187
      Related
      ENSMUSP00000029570.5, ENSMUST00000029570.8
      Conserved Domains (1) summary
      cd06174
      Location:40397
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000069.6 Reference GRCm38.p4 C57BL/6J

      Range
      116631164..116662692 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006501031.2XP_006501094.1  hippocampus abundant transcript 1 protein isoform X3

      Conserved Domains (2) summary
      cd06174
      Location:40367
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:42367
      MFS_1; Major Facilitator Superfamily
    2. XM_006501030.1XP_006501093.1  hippocampus abundant transcript 1 protein isoform X1

      Conserved Domains (2) summary
      cd06174
      Location:26383
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      pfam07690
      Location:28372
      MFS_1; Major Facilitator Superfamily
    3. XM_011240023.2XP_011238325.1  hippocampus abundant transcript 1 protein isoform X2

      See identical proteins and their annotated locations for XP_011238325.1

      Conserved Domains (1) summary
      pfam07690
      Location:3314
      MFS_1; Major Facilitator Superfamily
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