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    Timm10b translocase of inner mitochondrial membrane 10B [ Mus musculus (house mouse) ]

    Gene ID: 14356, updated on 12-Aug-2018

    Summary

    Official Symbol
    Timm10bprovided by MGI
    Official Full Name
    translocase of inner mitochondrial membrane 10Bprovided by MGI
    Primary source
    MGI:MGI:1315196
    See related
    Ensembl:ENSMUSG00000089847 Vega:OTTMUSG00000025567
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Fxc1; Tim9b; Tim10b
    Expression
    Ubiquitous expression in adrenal adult (RPKM 28.9), duodenum adult (RPKM 21.6) and 28 other tissues See more
    Orthologs

    Genomic context

    See Timm10b in Genome Data Viewer
    Location:
    7; 7 E3
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (105640061..105656992)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (112789054..112790360)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene hemopexin Neighboring gene tripartite motif-containing 3 Neighboring gene ADP-ribosylation factor interacting protein 2 Neighboring gene dynein heavy chain domain 1 Neighboring gene mitochondrial ribosomal protein S36, pseudogene 2 Neighboring gene ribosomal RNA processing 8, methyltransferase, homolog (yeast) Neighboring gene integrin linked kinase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    mitochondrial import inner membrane translocase subunit Tim10 B
    Names
    Fracture Callus 1
    fractured callus 1
    fractured callus expressed transcript 1
    mitochondrial import inner membrane translocase subunit Tim9 B
    small zinc finger-like protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001360052.1NP_001346981.1  mitochondrial import inner membrane translocase subunit Tim10 B isoform a

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) encodes the longest isoform (a).
      Source sequence(s)
      AC125227
      Conserved Domains (1) summary
      pfam02953
      Location:964
      zf-Tim10_DDP; Tim10/DDP family zinc finger
    2. NM_001360053.1NP_001346982.1  mitochondrial import inner membrane translocase subunit Tim10 B isoform b

      Status: VALIDATED

      Source sequence(s)
      AC125227, BY707453
      Conserved Domains (1) summary
      pfam02953
      Location:967
      zf-Tim10_DDP; Tim10/DDP family zinc finger
    3. NM_001360054.1NP_001346983.1  mitochondrial import inner membrane translocase subunit Tim10 B isoform c

      Status: VALIDATED

      Source sequence(s)
      AC125227, AV583975
    4. NM_001360055.1NP_001346984.1  mitochondrial import inner membrane translocase subunit Tim10 B isoform d

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4), as well as variants 5 and 6, encodes isoform d.
      Source sequence(s)
      AC125227
      Conserved Domains (1) summary
      pfam02953
      Location:964
      zf-Tim10_DDP; Tim10/DDP family zinc finger
    5. NM_001360056.1NP_001346985.1  mitochondrial import inner membrane translocase subunit Tim10 B isoform d

      Status: VALIDATED

      Description
      Transcript Variant: This variant (5), as well as variants 4 and 6, encodes isoform d.
      Source sequence(s)
      AC125227, AK010994
      Conserved Domains (1) summary
      pfam02953
      Location:964
      zf-Tim10_DDP; Tim10/DDP family zinc finger
    6. NM_001360058.1NP_001346987.1  mitochondrial import inner membrane translocase subunit Tim10 B isoform e

      Status: VALIDATED

      Source sequence(s)
      AC125227, CK622744
      Conserved Domains (1) summary
      pfam02953
      Location:964
      zf-Tim10_DDP; Tim10/DDP family zinc finger
    7. NM_001360059.1NP_001346988.1  mitochondrial import inner membrane translocase subunit Tim10 B isoform f

      Status: VALIDATED

      Source sequence(s)
      AC125227
      Conserved Domains (1) summary
      pfam02953
      Location:964
      zf-Tim10_DDP; Tim10/DDP family zinc finger
    8. NM_001360060.1NP_001346989.1  mitochondrial import inner membrane translocase subunit Tim10 B isoform g

      Status: VALIDATED

      Source sequence(s)
      AC125227, AK003421
      Conserved Domains (1) summary
      pfam02953
      Location:144
      zf-Tim10_DDP; Tim10/DDP family zinc finger
    9. NM_001360061.1NP_001346990.1  mitochondrial import inner membrane translocase subunit Tim10 B isoform h

      Status: VALIDATED

      Source sequence(s)
      AC125227
    10. NM_019502.3NP_062375.1  mitochondrial import inner membrane translocase subunit Tim10 B isoform d

      See identical proteins and their annotated locations for NP_062375.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (6), as well as variants 4 and 5, encodes isoform d.
      Source sequence(s)
      AC125227
      Consensus CDS
      CCDS21657.1
      UniProtKB/Swiss-Prot
      Q9WV96
      Related
      ENSMUSP00000102395.1, OTTMUSP00000031047, ENSMUST00000106783.7
      Conserved Domains (1) summary
      pfam02953
      Location:964
      zf-Tim10_DDP; Tim10/DDP family zinc finger

    RNA

    1. NR_153392.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC125227
    2. NR_153393.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC125227, BY233702

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      105640061..105656992
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006507374.3XP_006507437.1  mitochondrial import inner membrane translocase subunit Tim10 B isoform X1

      UniProtKB/Swiss-Prot
      Q9WV96
      Related
      ENSMUSP00000057061.3, OTTMUSP00000031048, ENSMUST00000058333.9, OTTMUST00000062866
      Conserved Domains (1) summary
      pfam02953
      Location:964
      zf-Tim10_DDP; Tim10/DDP family zinc finger

    RNA

    1. XR_001785480.1 RNA Sequence

    2. XR_001785479.1 RNA Sequence

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