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    Il4i1 interleukin 4 induced 1 [ Mus musculus (house mouse) ]

    Gene ID: 14204, updated on 7-Oct-2018

    Summary

    Official Symbol
    Il4i1provided by MGI
    Official Full Name
    interleukin 4 induced 1provided by MGI
    Primary source
    MGI:MGI:109552
    See related
    Ensembl:ENSMUSG00000074141 Vega:OTTMUSG00000029474
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    H4; H-4; H46; LAO; Fig1; H-46; LAAO; Fig1-ps
    Expression
    Biased expression in spleen adult (RPKM 71.1), testis adult (RPKM 39.3) and 7 other tissues See more

    Genomic context

    See Il4i1 in Genome Data Viewer
    Location:
    7 B3; 7 28.93 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (44836288..44840809)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (52091658..52096179)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 29791 Neighboring gene activating transcription factor 5 Neighboring gene interleukin 4 induced 1B Neighboring gene nucleoporin 62 Neighboring gene TBC1 domain family, member 17 Neighboring gene AKT1 substrate 1 (proline-rich) Neighboring gene microRNA 707 Neighboring gene polynucleotide kinase 3'- phosphatase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from BioSystems

    General gene information

    Markers

    Readthrough Il4i1b

    Readthrough gene: Il4i1b, Included gene: Nup62

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    L-amino-acid oxidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    L-amino-acid oxidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    L-amino-acid oxidase activity ISO
    Inferred from Sequence Orthology
    more info
     
    oxidoreductase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    aromatic amino acid family metabolic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cellular amino acid catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    lysosome IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    L-amino-acid oxidase
    Names
    IL4-induced protein 1
    histocompatibility 46
    interleukin-4-induced protein 1
    interleukin-four induced gene 1
    interleukin-four induced gene-1 protein
    interleukin-four induced protein-1
    protein Fig-1
    NP_034345.2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010215.3NP_034345.2  L-amino-acid oxidase precursor

      See identical proteins and their annotated locations for NP_034345.2

      Status: VALIDATED

      Source sequence(s)
      AK150582, AK151731, U70429
      Consensus CDS
      CCDS21217.1
      UniProtKB/Swiss-Prot
      O09046
      UniProtKB/TrEMBL
      A0A0R4J0C2
      Related
      ENSMUSP00000033015.7, OTTMUSP00000037752, ENSMUST00000033015.7, OTTMUST00000073030
      Conserved Domains (1) summary
      pfam01593
      Location:75503
      Amino_oxidase; Flavin containing amine oxidoreductase

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      44836288..44840809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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