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    Dmwd dystrophia myotonica-containing WD repeat motif [ Mus musculus (house mouse) ]

    Gene ID: 13401, updated on 5-Aug-2018

    Summary

    Official Symbol
    Dmwdprovided by MGI
    Official Full Name
    dystrophia myotonica-containing WD repeat motifprovided by MGI
    Primary source
    MGI:MGI:94907
    See related
    Ensembl:ENSMUSG00000030410 Vega:OTTMUSG00000022947
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Dm9; DMR-N9
    Expression
    Ubiquitous expression in ovary adult (RPKM 66.7), adrenal adult (RPKM 65.5) and 28 other tissues See more
    Orthologs

    Genomic context

    See Dmwd in Genome Data Viewer
    Location:
    7 A3; 7 9.46 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (19076090..19082778)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (19661549..19668124)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene symplekin Neighboring gene radial spoke head 6 homolog A (Chlamydomonas) Neighboring gene microRNA 3100 Neighboring gene dystrophia myotonica-protein kinase Neighboring gene sine oculis-related homeobox 5

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC37679, MGC115779

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    cellular_component ND
    No biological Data available
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    dystrophia myotonica WD repeat-containing protein
    Names
    dystrophia myotonica linked gene, N9
    dystrophia myotonica-containing WD repeat motif protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_010058.2NP_034188.2  dystrophia myotonica WD repeat-containing protein

      See identical proteins and their annotated locations for NP_034188.2

      Status: VALIDATED

      Source sequence(s)
      AC170864, AK086899, BC089027, CF169673
      Consensus CDS
      CCDS20888.2
      UniProtKB/Swiss-Prot
      Q08274
      UniProtKB/TrEMBL
      Q5HZG7
      Related
      ENSMUSP00000032570.7, OTTMUSP00000026393, ENSMUST00000032570.13, OTTMUST00000055187
      Conserved Domains (3) summary
      COG2319
      Location:98376
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:214254
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:281375
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      19076090..19082778
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006539524.3XP_006539587.1  dystrophia myotonica WD repeat-containing protein isoform X1

      Conserved Domains (3) summary
      COG2319
      Location:74352
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:190230
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:257351
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    2. XM_006539525.3XP_006539588.1  dystrophia myotonica WD repeat-containing protein isoform X2

      Conserved Domains (3) summary
      COG2319
      Location:74352
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:190230
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:257351
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
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