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    CCDC159 coiled-coil domain containing 159 [ Homo sapiens (human) ]

    Gene ID: 126075, updated on 5-Mar-2024

    Summary

    Official Symbol
    CCDC159provided by HGNC
    Official Full Name
    coiled-coil domain containing 159provided by HGNC
    Primary source
    HGNC:HGNC:26996
    See related
    Ensembl:ENSG00000183401 AllianceGenome:HGNC:26996
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Ubiquitous expression in testis (RPKM 10.3), prostate (RPKM 10.0) and 25 other tissues See more
    Orthologs
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    Genomic context

    See CCDC159 in Genome Data Viewer
    Location:
    19p13.2
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (11346519..11354944)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (11473497..11481922)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (11457195..11465620)

    Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene tetraspanin 16 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14008 Neighboring gene RAB3D, member RAS oncogene family Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10107 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr19:11456465-11457295 Neighboring gene transmembrane protein 205 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:11461146-11461646 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10108 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr19:11467020-11467961 Neighboring gene phospholipid phosphatase related 2 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 10109 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14009 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14010 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14011 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 14012 Neighboring gene SWIM-type zinc finger 7 associated protein 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    coiled-coil domain-containing protein 159

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001080503.3NP_001073972.2  coiled-coil domain-containing protein 159

      Status: VALIDATED

      Source sequence(s)
      CA848583, CB241007, DC416232
      Consensus CDS
      CCDS45976.1
      UniProtKB/Swiss-Prot
      B4DEG3, B4DWR8, B4E133, B7ZAM4, P0C7I6
      Related
      ENSP00000402239.1, ENST00000458408.6

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

      Range
      11346519..11354944
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047438148.1XP_047294104.1  coiled-coil domain-containing protein 159 isoform X5

    2. XM_017026256.3XP_016881745.1  coiled-coil domain-containing protein 159 isoform X2

    3. XM_047438146.1XP_047294102.1  coiled-coil domain-containing protein 159 isoform X4

    4. XM_011527678.3XP_011525980.2  coiled-coil domain-containing protein 159 isoform X7

    5. XM_017026260.3XP_016881749.1  coiled-coil domain-containing protein 159 isoform X9

    6. XM_047438147.1XP_047294103.1  coiled-coil domain-containing protein 159 isoform X5

    7. XM_047438149.1XP_047294105.1  coiled-coil domain-containing protein 159 isoform X5

    8. XM_017026261.3XP_016881750.1  coiled-coil domain-containing protein 159 isoform X11

    9. XM_047438150.1XP_047294106.1  coiled-coil domain-containing protein 159 isoform X5

    10. XM_017026255.2XP_016881744.1  coiled-coil domain-containing protein 159 isoform X1

    11. XM_006722643.2XP_006722706.1  coiled-coil domain-containing protein 159 isoform X3

      Conserved Domains (1) summary
      TIGR00618
      Location:35224
      sbcc; exonuclease SbcC
    12. XM_017026258.3XP_016881747.1  coiled-coil domain-containing protein 159 isoform X6

    13. XM_017026259.3XP_016881748.1  coiled-coil domain-containing protein 159 isoform X8

    14. XM_024451347.2XP_024307115.1  coiled-coil domain-containing protein 159 isoform X10

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060943.1 Alternate T2T-CHM13v2.0

      Range
      11473497..11481922
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054319762.1XP_054175737.1  coiled-coil domain-containing protein 159 isoform X5

    2. XM_054319763.1XP_054175738.1  coiled-coil domain-containing protein 159 isoform X5

    3. XM_054319770.1XP_054175745.1  coiled-coil domain-containing protein 159 isoform X11

    4. XM_054319764.1XP_054175739.1  coiled-coil domain-containing protein 159 isoform X5

    5. XM_054319758.1XP_054175733.1  coiled-coil domain-containing protein 159 isoform X1

    6. XM_054319760.1XP_054175735.1  coiled-coil domain-containing protein 159 isoform X3

    7. XM_054319765.1XP_054175740.1  coiled-coil domain-containing protein 159 isoform X6

    8. XM_054319767.1XP_054175742.1  coiled-coil domain-containing protein 159 isoform X8

    9. XM_054319769.1XP_054175744.1  coiled-coil domain-containing protein 159 isoform X10

    10. XM_054319766.1XP_054175741.1  coiled-coil domain-containing protein 159 isoform X7

    11. XM_054319768.1XP_054175743.1  coiled-coil domain-containing protein 159 isoform X9

    12. XM_054319759.1XP_054175734.1  coiled-coil domain-containing protein 159 isoform X2

    13. XM_054319761.1XP_054175736.1  coiled-coil domain-containing protein 159 isoform X4