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    Caml calcium modulating ligand [ Mus musculus (house mouse) ]

    Gene ID: 12328, updated on 19-Mar-2019

    Summary

    Official Symbol
    Camlprovided by MGI
    Official Full Name
    calcium modulating ligandprovided by MGI
    Primary source
    MGI:MGI:104728
    See related
    Ensembl:ENSMUSG00000021501
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Camlg; AI385748
    Expression
    Ubiquitous expression in CNS E14 (RPKM 23.2), CNS E18 (RPKM 22.1) and 28 other tissues See more
    Orthologs

    Genomic context

    See Caml in Genome Data Viewer
    Location:
    13 B1; 13 30.06 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (55623005..55632416)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (55724366..55733777)

    Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene transmembrane p24 trafficking protein 9 Neighboring gene xylosylprotein beta1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 Neighboring gene RIKEN cDNA B230219D22 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    cell adhesion molecule binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    ubiquitin protein ligase binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    epidermal growth factor receptor signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    negative regulation of proteasomal ubiquitin-dependent protein catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    negative regulation of protein ubiquitination ISO
    Inferred from Sequence Orthology
    more info
     
    protein stabilization ISO
    Inferred from Sequence Orthology
    more info
     
    receptor recycling IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    calcium signal-modulating cyclophilin ligand

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007596.2NP_031622.2  calcium signal-modulating cyclophilin ligand

      See identical proteins and their annotated locations for NP_031622.2

      Status: VALIDATED

      Source sequence(s)
      AK002895, BY632386, CF915604
      Consensus CDS
      CCDS26551.1
      UniProtKB/Swiss-Prot
      P49070
      Related
      ENSMUSP00000021963.4, ENSMUST00000021963.4
      Conserved Domains (1) summary
      pfam14963
      Location:21290
      CAML; Calcium signal-modulating cyclophilin ligand

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

      Range
      55623005..55632416
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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