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    Calm3 calmodulin 3 [ Mus musculus (house mouse) ]

    Gene ID: 12315, updated on 31-Jan-2019

    Summary

    Official Symbol
    Calm3provided by MGI
    Official Full Name
    calmodulin 3provided by MGI
    Primary source
    MGI:MGI:103249
    See related
    Ensembl:ENSMUSG00000019370
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CaMA; Cam3; Camc; R75142
    Expression
    Ubiquitous expression in cortex adult (RPKM 496.4), frontal lobe adult (RPKM 463.0) and 28 other tissues See more
    Orthologs

    Genomic context

    See Calm3 in Genome Data Viewer
    Location:
    7 A2; 7 9.15 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 7 NC_000073.6 (16915379..16924032, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 7 NC_000073.5 (17500728..17509381, complement)

    Chromosome 7 - NC_000073.6Genomic Context describing neighboring genes Neighboring gene guanine nucleotide binding protein (G protein), gamma 8 Neighboring gene prostaglandin I receptor (IP) Neighboring gene predicted gene, 45972 Neighboring gene predicted gene, 32630 Neighboring gene PNMA-like 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    adenylate cyclase binding ISO
    Inferred from Sequence Orthology
    more info
     
    calcium ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    calcium ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    calcium ion binding TAS
    Traceable Author Statement
    more info
    PubMed 
    calcium-dependent protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    ion channel binding ISO
    Inferred from Sequence Orthology
    more info
     
    nitric-oxide synthase binding ISO
    Inferred from Sequence Orthology
    more info
     
    nitric-oxide synthase regulator activity ISO
    Inferred from Sequence Orthology
    more info
     
    phosphatidylinositol 3-kinase binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein N-terminus binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein domain specific binding ISO
    Inferred from Sequence Orthology
    more info
     
    protein phosphatase activator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    type 3 metabotropic glutamate receptor binding ISO
    Inferred from Sequence Orthology
    more info
     
    Process Evidence Code Pubs
    G2/M transition of mitotic cell cycle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    calcium-mediated signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    regulation of calcium ion transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    growth cone ISO
    Inferred from Sequence Orthology
    more info
     
    colocalizes_with mitochondrial membrane ISO
    Inferred from Sequence Orthology
    more info
     
    myelin sheath ISO
    Inferred from Sequence Orthology
    more info
     
    neuron projection ISO
    Inferred from Sequence Orthology
    more info
     
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    colocalizes_with synaptic vesicle membrane ISO
    Inferred from Sequence Orthology
    more info
     
    voltage-gated potassium channel complex IGI
    Inferred from Genetic Interaction
    more info
    PubMed 

    General protein information

    Preferred Names
    calmodulin-3
    Names
    caM
    NP_031616.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_007590.3NP_031616.1  calmodulin-3

      See identical proteins and their annotated locations for NP_031616.1

      Status: VALIDATED

      Source sequence(s)
      BC050926, BE853985
      Consensus CDS
      CCDS39789.1
      UniProtKB/Swiss-Prot
      P0DP26, P0DP27, P0DP28
      Related
      ENSMUSP00000019514.9, ENSMUST00000019514.9
      Conserved Domains (1) summary
      PTZ00184
      Location:1149
      PTZ00184; calmodulin; Provisional

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000073.6 Reference GRCm38.p4 C57BL/6J

      Range
      16915379..16924032 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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